Brachypodium distachyon (stiff brome): 100843493
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Entry
100843493 CDS
T01717
Name
(RefSeq) syntaxin-43
KO
K08489
syntaxin 16
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100843493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100843493
Membrane trafficking [BR:
bdi04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
100843493
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
GCP_C_terminal
EF-G-binding_N
Motif
Other DBs
NCBI-GeneID:
100843493
NCBI-ProteinID:
XP_010228083
UniProt:
I1H1H1
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All DBs
Position
1:complement(49360007..49363644)
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AA seq
327 aa
AA seq
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MATRNRTPLYRKYRDALRHVRAPAGAPSSSSSSGGGGGGPVIEMASLLRPDRNYAPLSTD
DPSAASSRGAVTVGLPPAWVDVSEEISANMQRAKTKMAELAKAHAKALMPSFGDGRDDQR
AIEVLTHEVTDLLKRSEKKLQKLSMKDSSEDSNIRKNVQRSLATDLQNLSMEFRRKQSSY
LKQLRQQKEGQDGVDLEMNINGSKSTFQLEDDEFEDVGFTEVQMSKLKKSEAFTRERERE
IEQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGYKQLQKAERTQKKG
GMVMCATVLVILIFIMIILLILKKILF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcggaaccggacgccgctctaccgcaagtaccgcgacgcgctgcgccacgtc
cgcgcgccggccggggcgccctcctcgtcttcctcttcgggaggaggcggaggcgggccg
gtgatcgagatggcctcgctgctgcgtcccgaccgtaactacgcgcccctcagcaccgac
gacccctccgccgcctccagtagaggtgcggtgacggtcgggctgcctccagcctgggtg
gatgtctccgaagagatatctgcaaacatgcagcgagcaaagacgaaaatggcggagctg
gctaaggcgcacgccaaggccttgatgccgtccttcggtgatggtagagatgaccagcga
gcaattgaggttctcacgcatgaggtgacagacctgctgaagaggtcagaaaagaagctg
cagaagctgtccatgaaggattcctcggaggattcaaatatccgaaaaaatgtccagcgt
tcccttgctacagacctgcaaaatctttcgatggaattccggagaaaacagtcgtcgtat
ttgaagcagcttcgccaacagaaagaggggcaagatggtgttgatttggaaatgaatatt
aacgggtctaagtcgacatttcaacttgaagacgatgaatttgaggatgtgggtttcact
gaggttcagatgtcaaaacttaagaaaagcgaagcattcactagagaaagagaaagagaa
attgaacaggttgtcgaatcggtcaatgagcttgcacagatcatgaaagatctttcagtt
cttgtgattgatcagggaacaattgttgatcggatagactacaatatacagaatgttgca
gcttcagttgaagagggttataaacaattgcaaaaggctgagaggacacaaaagaaagga
ggcatggtgatgtgtgccactgtcctcgtcattcttatcttcatcatgataatcctcctg
attttgaagaagatccttttctga
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