Brachypodium distachyon (stiff brome): 100843494
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Entry
100843494 CDS
T01717
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100843494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100843494
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100843494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_33
AAA_2
TIP49
AAA_16
AAA_28
RNA_helicase
Rad17
AAA_17
nSTAND3
AAA_18
NPHP3_N
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
Mg_chelatase
NB-ARC
TsaE
Cytidylate_kin2
AAA_3
Bac_DnaA
Parvo_NS1
ATPase_2
NTPase_1
SKI
Vps4_C
AAA_11
tRNA_lig_kinase
PduV-EutP
CPT
Motif
Other DBs
NCBI-GeneID:
100843494
NCBI-ProteinID:
XP_003557259
UniProt:
I1H1Y7
LinkDB
All DBs
Position
1:50539274..50544427
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AA seq
783 aa
AA seq
DB search
MGKRPRNVRAIRSNSFESYLRRLIADGGLAVPGCSADDVAGALRSRNPDLRRKQLGPFVA
AVRRALLSSMPAPAEAFSADSDVDSRASSPSSSRRQRRRLSHDASSSTSFSGDDDDGGAR
PPSPPPAFDVTKSMLRARYASLTPKKDPGTNQQLEIEVNAEKPRRRMTADGGAGGDSKLE
AAAVAPATTEGGGRVGKGPMFSDLGGMKTVIDELMMEVVVPLCHPQLPLRLGVRPVAGIL
LHGPPGCGKTTLAHAIANETGVPFYKISAPEIVSGVSGASEENIRILFQKAYRTAPSIVF
IDEIDAIASKRENLQREMERRIVTQLMTCMDEFHQNVGSDGSDLDSQSSEKKPGYVIVIG
ATNRPDAVDQALRRPGRFDREISLGVPDETARQQILKMLTKNLTLEAEGHFDLFKIARAT
PGYVGADLKALVDKAGNLAMKRIIIARKKLLGDDENNEQDWWRLPWNESEMENLCIAMDD
FENAVTMVQPSLRREGFSSVPDVTWEDVGGLDSLRKEFYRCIVRCIKYPEDYKEYGVNMQ
AGFLLFGPPGCGKTLIAKAVAHDAGASFIHIKGPELLNKYVGESESEVRKIFTRARTNSP
CILFFDEIDALTTKRGKEGGWVVERLLNQLLIELDGADQRHGVYVIGATNRIDVIDEAVL
RPGRFGKKHFVPLPGADERVSILKAHAKDKPVSADVDLDTLARRQECNNLSGADLASLVN
EAAMAALGEKIEFLENGTASRSLSFTREIELLHFEHALSKVKPSVSEQQRKHFDMLSKKY
SAD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggccgcggaacgtccgcgccatccggtctaactccttcgagtcctacctc
cggcggctcatagccgacggcgggctggccgtgccgggctgctccgccgacgacgtcgcc
ggcgccctccgctcccgcaaccccgacctacgccgcaagcagctcggccccttcgtcgcc
gccgtccgccgcgcgctcctctcctccatgcccgcccccgccgaggccttctccgccgac
tcggacgtcgactcccgagcctcctccccgtcctcctcccgccgccaacgccgccgcctc
agccacgacgcttcctcctccacctccttctccggagacgacgacgatggcggcgctcgc
ccgccctcccctccccccgccttcgacgtcaccaagtcgatgctccgcgcgcgctacgcc
tccctgacgcccaaaaaggaccccgggaccaaccagcagctcgagatcgaggtcaatgca
gagaagccccgccggcggatgacagctgatggtggtgccggtggcgactccaagctggag
gctgcggcggttgcgccagctactaccgaaggaggcggcagggtggggaaggggccaatg
ttctctgacctcggcggtatgaaaacggtgatagacgagctgatgatggaggtggtcgtt
ccgctgtgccatccgcagctgccactgcggcttggtgttcggcctgtggccgggattctg
ctccatggaccgcctggctgtggaaaaacaacgcttgcccacgccattgccaacgagact
ggcgtgccattctacaagatatcagcgccggaaatcgtctctggggtttctggagcttct
gaggaaaacatcagaatcttgtttcaaaaagcttacaggactgctccatcaattgtattt
atagacgagatagatgcaattgcatccaagagggagaatttgcaacgagaaatggaacgg
cggatagttacacagttaatgacatgcatggacgagttccaccagaatgttgggtcagac
ggtagtgacttggattcgcaatcatccgaaaagaagcctggctatgttattgtcattgga
gctaccaatagacctgatgctgttgaccaagcacttcggagaccagggaggtttgatcga
gagatatctcttggtgttccagatgagactgcacggcaacagattctgaagatgcttact
aagaaccttacactggaggcagaaggccactttgacttgttcaagatagcaagggctaca
ccaggatatgttggtgcggacttgaaggcattagtggacaaagcagggaatcttgcaatg
aaaagaataattattgcaagaaaaaaacttttgggggatgatgaaaacaatgagcaggac
tggtggagacttccttggaatgaaagcgagatggagaacctatgtattgctatggatgac
tttgagaatgcagtcacaatggttcaaccatcattgagaagggaaggattttcttctgtc
cctgatgtcacatgggaggacgttggaggtcttgattcattaaggaaagaattttaccgc
tgcattgttcgttgtatcaagtacccggaagattataaggaatatggagtgaacatgcaa
gctgggtttttgctgtttggacctccaggctgtgggaaaacgctgatagcaaaagcagtt
gcacatgacgcaggggctagttttattcacattaaggggcctgagctattgaacaagtat
gtcggggagagtgaatcagaagtaaggaaaatattcacccgtgcacgaactaactctccg
tgcatcctattttttgacgagatagatgctttgacgacaaaaagagggaaggagggaggg
tgggttgttgaacgtctcctaaatcagttactcattgaactcgatggtgctgatcagcga
catggtgtttatgttattggagctacaaacagaattgacgtcatagacgaggctgttcta
cgacctggtagatttgggaagaaacattttgttcctttacccggtgctgatgaacgggtt
tcgatattgaaagcacatgccaaggataaacccgtctctgctgatgttgatttggacaca
cttgcacgtcgacaggagtgcaataatctcagtggtgcagacctagcttcactggtgaac
gaagcagccatggcagcgttgggagagaaaatcgaattcctagagaatgggacagcctca
agaagtttgtcatttacgcgtgagattgaactcttgcactttgaacatgctctatctaaa
gtaaagccatcggtatcagaacagcaaaggaaacactttgacatgctgtcaaagaaatat
tcggccgattga
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