Brachypodium distachyon (stiff brome): 100843531
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Entry
100843531 CDS
T01717
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100843531
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100843531
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100843531
Membrane trafficking [BR:
bdi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
100843531
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Vps54_N
DUF7791
Motif
Other DBs
NCBI-GeneID:
100843531
NCBI-ProteinID:
XP_010239705
UniProt:
I1IWB3
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All DBs
Position
5:complement(4366428..4384703)
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AA seq
988 aa
AA seq
DB search
MASRPPLRTVSTVSTASSSYSTDSPTAAPPGGVPQSITALLNNPLPSAASSSYWLPWPPP
APLPDAPPPPSNPCEVSRADFAPYLATIADPFARFADIRLHASAELAASDDDSRGARVVS
SGLAACLREVPALFFKEDFALEEGATFESACPLGDDNLQERLGQHLDVVEAHLVREIARR
SESFYEAQGRLRGLDGEIVAAVGRIRELREVVRVLTGDLVGDAQQVQELNATRGNLVALQ
EKLTIILYVSQALTALKLLVLAADCAGALDVIDDLQNLLDTDELAGLYCFRHIRDQLGTS
LDSVNSILSAEFVRAAVPDGKTVDAMILSNVKRRSSMPLNGTEHEVIIDEEESFILRDRL
LPLIICLLRTEKVPAVLRIYRDTLITVMKASIKATVAELLPTLISRPIDSDSVTGDRAAD
SDAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLLQAAEVKRIVEWIMRNLEGNISADA
TNPVVQHGSSVDFPQENDYGVASRVSNTVTRSTTKLTVFQGKTTDMSSINSIKNVRADVL
RESTEAVFAACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNITEEFIAATEKIGGRLGY
NIRGILQQQSKQFVDYQHNVRMTKIKAVLDQETWVGVDVPEEFQAIVLSLSSTDFPVNGM
EMPSIDNNSKLSEEGVSTSPETAYSDNGNGTSTTNHENSAESTSQTENSVVGHVRSISQT
IVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGA
GAMQVSGLKSITSKHLALASQIISFIYSLIPDIRRVLFLKIPEARKQLLMSELDRVTQDY
KIHRDEIHTKLIQIMRERLLANLRKLPQIMESWNGPDDNDLQPSLFAKAVTKEVTYLHRI
LSQILLEVDVQAIFRQVVQIFHSHITEAFSKLEVNTPQAKNRLCRDVQHILVCIRKLPAQ
NFSAETIRNYGLLDEFLAEKFGTKLTSD
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgccctcccctccgcaccgtctccaccgtctccaccgcctcctcctcctac
tccaccgactcccccaccgccgcgccccccggcggcgtcccgcagtccatcaccgcgctc
ctcaacaacccgctaccctccgccgcctcctcctcttactggctcccgtggcccccgcct
gccccgctacccgacgcaccgcccccaccctccaacccctgcgaggtctcccgcgccgac
ttcgcaccctacctcgccaccatcgccgatccattcgcgcgcttcgccgacatccgcctc
cacgctagcgccgagctcgccgcctccgatgatgacagccgcggtgcccgggtggtatcg
tccggccttgccgcctgcctccgcgaggtccctgcgctcttcttcaaggaggacttcgcg
ctagaggaaggggccactttcgagtctgcctgcccgctcggcgatgacaatttacaggag
cgcctcgggcagcacctggatgtcgtggaggcacacctcgttcgggagatcgctcggcgg
tccgagtcgttctacgaggcgcaggggcggctccgtggtctcgacggggagattgtagcg
gctgtcgggaggatccgggagctcagggaggtggtccgagtgctcacaggcgaccttgtc
ggggatgcacagcaggtgcaggagctcaatgcgactcgaggcaaccttgtcgcgctgcag
gagaagctcaccatcattctctacgtcagccaggcgcttactgcactcaagctgcttgtg
ttagcagcagattgtgctggtgctcttgatgtcattgatgacttgcaaaatttactggat
acagatgaacttgctgggctttattgctttcggcatatccgagatcaactgggaacatca
ttagattccgtcaacagcattctttcagcagaatttgtgcgggctgctgttcctgatgga
aaaactgtagatgcaatgatcctatcaaatgtgaaaaggcggtcttctatgccactcaat
gggacagagcatgaagtaatcatagatgaggaagaaagcttcattctcagagatcgtctt
ctccccctcattatttgcctgctaagaacggaaaaagttcctgcagtgctaagaatttac
cgggatacacttattactgttatgaaagcttcaattaaagccacagtagcagagttgctt
ccaactttaatttccagaccaatagattctgattcagtaactggagacagagctgccgat
tctgatgctggaggccagtctttagcaaataagctgcggagtctatcatctgaagggttt
gttcaactgttgtcggctatttttaggatagttcaggtgcatctgctgcaagcagctgaa
gttaaaagaatagtggagtggatcatgagaaaccttgaggggaacataagtgctgatgct
acaaatcctgtcgtacaacatggcagctcagttgattttccccaagagaatgactatggt
gttgcttcacgggtctctaatactgttacccgtagtactactaagcttacagtttttcaa
ggaaaaacaactgatatgtccagtataaactcaataaagaatgtccgagctgatgtgttg
agagaaagcacagaagcagttttcgctgcatgtgatgctgcccatggacgatgggccaag
ctgttaggtgttcgtgctgctctacatccgaagttaagacttcaggagttcctgatcatc
tataatataacagaagaatttatagctgctactgaaaagattggaggaaggctgggttac
aatattcgtggaattctacagcaacaatcaaagcaatttgttgattatcagcacaatgtt
cggatgacaaaaatcaaggcagttctagaccaagagacatgggtcggtgttgatgttcct
gaagaattccaggcgattgttctgtcactgtcatccactgattttcctgtgaatggcatg
gagatgcctagtattgataataactcaaagctcagtgaggaaggagtttctacaagtcca
gaaacggcatattcagataatggcaatggaacatctacgacaaaccatgaaaatagtgct
gaatccacttctcagactgaaaatagtgttgttgggcatgttaggtcaatctcgcaaacc
attgtacatggaggagttggctatcatatggtaaactgcggtttgatattgttgaagatg
ctatcagaatatgttgatatcagtaaatgtttgccatcgttatcttttgaggttgtccaa
cgtgttgttgaaatattaaagcttttcaacaccaggacttgccaactggttcttggtgca
ggtgccatgcaggtgtctggtctgaaatcaattacttctaagcatttggcgttggcaagt
caaattatcagtttcatatattctttgattccggatattcggcgtgtacttttcctgaaa
atacccgaagcacgcaaacagctgttgatgtctgaactggatagagttactcaggactac
aagatccatcgagacgaaattcacaccaagctgatccaaataatgagagagagattgcta
gcaaatctgagaaaattaccccaaatcatggaaagttggaacggaccagatgataatgat
ttgcagccaagtctatttgccaaagctgttacgaaggaagttacttatttgcatcgcatc
ctttctcaaatactacttgaggtcgacgtgcaagcaatatttaggcaagtagttcaaata
ttccattcacatattacagaagcattttcaaagttggaagtcaacacccctcaggcaaag
aacagattatgccgagatgttcagcatattcttgtatgtattcggaagttgcctgcccag
aacttcagtgctgaaactattcgaaattatggtcttctcgatgaattcttggctgaaaag
tttgggacaaagttgacgagtgattga
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