Brachypodium distachyon (stiff brome): 100843596
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Entry
100843596 CDS
T01717
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X2
KO
K13338
peroxin-1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100843596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100843596
Membrane trafficking [BR:
bdi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100843596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_22
ATPase_2
DUF815
AAA_5
NPHP3_N
AAA_14
AAA_19
AAA_18
RNA_helicase
AAA_28
Bac_DnaA
nSTAND3
AAA_24
IstB_IS21
AAA_7
NACHT
AAA_17
TsaE
RuvB_N
ABC_tran
AAA_33
AAA_25
NB-ARC
AAA_30
AAA_29
Viral_helicase1
AAA_2
Mg_chelatase
ResIII
ORC-CDC6-like
AAA_23
AAA_11
Rad17
Sigma54_activat
ATP_bind_1
NTPase_1
KAP_NTPase
T2SSE
TIP49
Cytidylate_kin
SRP54
Zeta_toxin
cobW
AAA_13
KTI12
Motif
Other DBs
NCBI-GeneID:
100843596
NCBI-ProteinID:
XP_014757702
LinkDB
All DBs
Position
4:43119447..43128254
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AA seq
984 aa
AA seq
DB search
MEVVVRPVPGVRSCFAALPLPVIQALERTAPSGSLPAVLAIELRTPDGACWRLAWAGAVS
ASPNAVEVSQQFAGCILLADNTKAALSAVPVLPKAKFVSVEPISEDDWEVLELNSELAEE
AILKQVGIVYGGMKFPLWLHNHNVVEFLVVSSSPSNSIVQLIPGTEVIVAPKKRKDEVNS
HKCEQDVLKQPHKKALLRVQEAGGKYVHQFEYNGIQLGVFVTYVVQIHPDTAANLSLSDL
QLVSITPKFSPKESTGNGKGSDQQIKGSVRGVNSGRRIVVHIILLDSVAKEHIMLPQSIC
CYIGTGVHSWVYVQRFSPIVNKNAQSITISPVHFKVLERNADDTCVLDSQGQDICRTGEM
PSPACSSLGDKISMLCEFNDITAIPNRVESSKLKQERSFIRSWIIGQLKEISSQITQLEL
NTVLLPPETLLHFQVIDHRRGSPVDLIYLLTITSGFGVKHEKIELVMATEYGTDSFERAL
QKLELNRAISLDSTMERTRTSFDKSVFSLSWLEVEFSDITKRLSVLLSSTSLKLLSRINC
PCPGNVLIYGPPGSGKTTLCKAVARHFKEHTEILAHVVYVACSKLAIENNKNQLQAIADC
IYEAIVHFPSILVFDDLESLISFSSENKKSQSSNPSAIVKYLVDVLDDYRDKSHGMCGHG
PVAFVASVKSLKCLPQELTSSGRFDLHVQLPGLSVPARIEILKQTIDKLHLRCSEEIVSD
IASKCDGYDAYDLEILVDNAVLCASDRLLGSSSINLVEEDFLKAMVDFSPIAMRDISKFS
PENISGWEDVGGLSEVVNFIKETIELPLKYPKFFAGAPVRLRSNILLYGPTGCGKTHVVR
AAAAAYSLHFIRIKGPELMNMYIGSTEQYVRDTFAKAAAAAPCLLFFDEFESLVPQRGKH
GTQVTDRVVNQLTELDGVEALTGVFVFAATNKPREIDAALLRPGRFDRLVFCDFPQWDER
LGILRVLSKEVNFLFECYFIYHYI
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtggtgcgcccggtgcccggcgtccggagctgcttcgccgcgctccccctc
cccgtcatccaagccctcgagcgcaccgccccctccggctccctccccgcggtcctcgcc
atcgagctgcgcacgcccgacggagcatgctggcgccttgcttgggcaggcgccgtctcc
gcctcccctaatgccgtcgaagtttctcaacaatttgctgggtgtattttgttagctgac
aatacaaaagcagcacttagtgctgttcctgttctgccaaaagctaaatttgtttctgtg
gagccaataagtgaggatgactgggaagtattggagcttaactctgagttggcagaagag
gccattttgaaacaggttggtattgtttatggtggtatgaaattcccattatggctgcac
aaccataatgttgtggaatttcttgttgtttcatcatcacctagtaactcgatagttcaa
cttattcctggaactgaagttattgtcgcgccaaagaaaagaaaagatgaagtgaattct
cataagtgtgaacaagatgtactcaaacagccccataaaaaggcactcctccgtgtacag
gaagcaggagggaaatatgtacatcaatttgaatacaacggaattcaactgggtgtgttt
gttacatatgttgtacaaatacacccagatactgctgcaaatttgtctctcagtgatctt
cagctggtcagtatcactcctaaattttcaccaaaggagagtacgggaaatggaaaagga
tctgatcagcagattaagggttcagtgcgtggtgtaaacagtggtaggcgcattgttgtc
catatcatattattagattctgttgctaaagagcatattatgcttcctcaatccatctgc
tgttacattggaacaggagttcattcatgggtttatgtgcagagattctcgcccattgta
aacaagaacgcacagtcaataacaatttctccagtccactttaaggtgttggagagaaat
gctgatgatacctgtgtgttggactctcaaggacaggatatttgtcgaacgggtgagatg
ccttcacctgcttgttcttcccttggtgataaaatcagcatgttgtgtgagttcaatgac
attactgcaattccaaatagggtggaaagttctaagttgaagcaggagagatctttcatc
agatcatggattattgggcagttaaaggagatctcctcgcaaattacccaacttgaactg
aatacagtgcttctgccgcctgaaacattacttcactttcaagtgattgatcacagaaga
ggcagtcctgttgacctcatttacctattgacaattacttctggttttggtgtcaagcac
gaaaaaattgaactggtcatggcaactgaatatggcactgatagctttgaacgggctctt
cagaagttggagttgaatagggccatatccctggattcaacaatggaacgaacaaggacg
tcctttgacaaaagtgttttttctttaagttggctggaggttgaattttctgatatcaca
aaaagattaagtgtccttctgtcttcaacatctcttaaattattgagtagaataaactgc
ccctgcccaggaaatgttcttatctacggccctccaggttctgggaaaacaaccttatgc
aaagctgttgcaagacacttcaaagagcatacagaaattctggctcatgtggtttatgta
gcatgctcaaagctagctattgagaacaataagaaccaacttcaggcaattgcagactgt
atctatgaagctattgtccacttcccttcaattctagtattcgatgatctggaaagtttg
atttcattctcctcagagaacaaaaaatcacaatcatccaatcctagtgctattgtgaaa
tatttggtagatgtgctagatgattacagagataaaagccatggcatgtgtggacatgga
cctgttgcatttgtggcttcagttaagtcacttaagtgtcttcctcaagaattgacttcc
tcagggagatttgatcttcatgtccaacttcctggtttatctgttcctgcacgtatcgag
atactgaagcagacaatcgacaagcttcacttaagatgttctgaggaaattgtcagcgac
attgcttcaaaatgtgatggatatgatgcatatgatttggagattttggttgataacgct
gtgctttgtgcttctgatcgtttgcttgggtcttctagtataaatctggtggaagaagat
ttcctgaaagccatggtggacttttctcctatagcaatgcgcgacattagtaaattttct
cctgaaaatatcagtggatgggaagatgttggaggactttctgaagttgtaaattttata
aaagagactattgagttgccactaaaatatccgaagttttttgctggggctcctgtaagg
ctgcgatcaaacatcctcctgtatggcccaacaggctgtggcaaaacccatgttgtgagg
gctgcagctgctgcatattctttacatttcattcgaatcaaggggccagagttgatgaat
atgtacattggttctactgagcaatatgttcgtgatacgtttgcaaaggcagctgcggca
gcaccttgtttacttttctttgacgaatttgagtctcttgtaccacagcgaggaaaacat
ggtacgcaagttactgaccgcgttgtcaaccagttgactgaattagatggtgtagaagct
ctgacaggagtctttgtatttgctgccaccaacaagccacgcgaaattgatgctgcgcta
ttacgacctggaaggtttgatcgtcttgtcttctgtgactttccacagtgggatgagcgt
ctgggaatcctcagggtgctctccaaggaggttaattttctttttgaatgttatttcatt
tatcactatatatag
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