Brachypodium distachyon (stiff brome): 100843639
Help
Entry
100843639 CDS
T01717
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100843639
04121 Ubiquitin system [BR:
bdi04121
]
100843639
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100843639
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
100843639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
100843639
NCBI-ProteinID:
XP_003563997
LinkDB
All DBs
Position
1:42526443..42530333
Genome browser
AA seq
1120 aa
AA seq
DB search
MQPSTDQRRGNGGAATASSRGVWRPRSAAPMTPAAAAAAPGQIPAYAAPHPNNTAPPILP
LPTPASDNRSRHRRGPRRPNQNNGNYRRGPPQERAPSAPANAPAPADAPAPAAPAGNGSV
PQLVQEIQDKLARGAVECMICYDMVRRSAPVWSCGSCFSIFHLPCIRKWARSPASVSDAS
DPASSWRCPGCQSVHDVPARDIAYTCFCGRRRDPPNDLFLTPHSCGEPCSKPLDRTDPAA
KGASMEDVASRCPHVCVLQCHPGPCPPCKAFAPARPCPCGKQSITRRCADRSTPVTCGQQ
CEQLLPCRRHRCEKICHTGPCGDCEVNFSAQCFCGKKTETLLCGEMVLKGKLSEKDGVFS
CSDVCGHHLPCGNHDCQDVCHPGPCGDCELVPAKVTTCHCGKTKLQEKRVSCLDPIPTCD
KVCDKMLPCGVHRCKVTCHEGECPPCFVRVEQRCRCGASGQMVECYKVLKEEFRCNKPCG
RKKNCGRHRCSECCCPLSKPFAQHEGDNLDPHFCQIPCGKKLRCGQHGCQHLCHSGHCDP
CRETIFNDLTCACGRTSIPPPQPCGTPTPSCPHQCLVPQPCGHPASHQCHFGDCPPCVVP
VMRECIGGHVVLRNIPCGSKDIRCNQPCGKNRQCGLHACGKTCHPFPCDQPPTNGEASSS
SGVKASCLQICGAPRRECKHTCTALCHPSSPCPDVRCEFRVTITCSCGRISTTVPCSAGG
PSSGDNMFDISVIQNLSMPLQPVESTGKRVPLGQRKLSCDEECAKMERKRVLAEAFDITP
PNLDALHFGENTSASDLLSDLFRREPKWVLAIEERCKFLVLGKTRGNSSNNVKVHVFCHM
VKDKRDAIRLIADRWKLSVQAVGWEPKRFVTVHVTPKSKVPARVLGSKPGVPVSASHPYF
DPLVDMDPRLVVAMLDLPRDADVSSLVLRFGGECELVWLNDKNALAVFSDPARAATALRR
LDYGSAYQGAAMFCPSSSTQASSSGNIWVAGQRDGGLAAKGSANPWKKASTSEPDPSGDW
TVLGQAPGTSVLDQAPGSVWRRGDTASQVMGTNRWNALESDAATSLGTSNKHKPPPRSEA
GSSASAPRTGAGSSAETSARQSVSKLQPDIEVDDWEESCE
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctcaacggatcaacgccgcggcaacggcggcgctgccacggcttcctcccgt
ggcgtatggcggcctcgatccgctgcgccgatgacccccgccgctgccgccgccgccccc
ggtcagatccccgcttatgccgccccccaccctaacaacaccgccccgccgatcctgccc
ctccccacccctgcctcggacaaccgctcgcgccaccgccgcggcccgcgtcgcccgaat
cagaacaacggcaactaccgccgcggcccgccgcaggagagggctccttccgcgccggcg
aacgcgcctgcgcctgcagatgcccccgcacctgcggccccggcggggaacgggtccgtg
ccgcagctggtgcaggagatccaggacaagctggcgcggggcgcggtggagtgcatgatc
tgctacgacatggtgcggaggtcggctcccgtgtggtcctgcggcagctgcttctccatc
ttccacctcccttgcatccgcaagtgggcgcgctccccggcctccgtctccgacgcctcc
gacccagcctcctcctggcgctgccctgggtgccaatccgtgcacgatgttcccgctcgc
gacatcgcctacacctgcttctgtgggcgtcggcgtgatcccccaaacgatctcttcctc
acaccgcactcctgtggcgagccctgctccaagcccctcgacagaacagatcctgctgcc
aagggtgcctctatggaagacgtcgcctccaggtgcccgcacgtctgtgtcctgcagtgc
caccctggtccatgcccaccctgcaaggcgtttgctccggcccggccatgcccttgtggc
aagcagtctatcacacggaggtgcgcagaccgcagtacgcctgtcacgtgtgggcagcaa
tgcgagcagctgctcccctgccggaggcaccgttgtgagaagatctgccacactgggccg
tgcggggactgtgaggttaatttctctgcacagtgcttttgtggcaagaaaacagagacg
ttgttgtgtggcgaaatggtgctgaaggggaagctgtcggagaaggatggggtgttctca
tgcagcgatgtttgtggccaccatctgccatgtggcaatcatgattgtcaggatgtttgc
cacccggggccatgcggagactgcgagcttgtgcccgcgaaggtcacaacatgtcattgc
ggcaagacaaagctgcaggagaaacgggtgagctgcttggacccaatccccacttgtgat
aaggtttgcgacaagatgttgccatgtggggtgcataggtgcaaggttacatgtcacgag
ggagagtgcccgccctgctttgtgcgtgttgaacagaggtgccgatgtggcgcatcagga
cagatggtggagtgttacaaagtcttgaaagaagagttccgttgcaacaagccttgtggc
cgcaagaagaactgcgggaggcacaggtgcagtgagtgctgttgcccgctatcaaagccg
tttgctcagcatgaaggtgacaatctggatccccatttctgccagataccttgtggcaag
aagctccggtgtggacagcatggatgccagcatctctgccatagtggtcactgcgatcct
tgccgtgagaccatattcaatgatctcacttgtgcctgtggcaggacatctattccacca
ccgcaaccttgcggcacaccaactccttcatgcccacaccagtgcttggttccccagcct
tgcggacatccagcttcacatcaatgtcatttcggggactgcccaccttgtgttgttcca
gtgatgagagaatgcattgggggacatgtggtgttaaggaacattccttgtgggtcaaag
gatatcagatgcaaccagccctgtggaaagaaccgtcaatgtggactccatgcttgtggt
aagacttgccatcctttcccttgtgatcagccgcctacaaatggagaggctagttcaagc
tctggggtcaaagcttcgtgtttacaaatatgtggtgctccaaggagggaatgtaagcac
acttgcactgccctatgccacccatcatcaccttgcccggacgtgagatgtgaattccgt
gtgactattacctgttcctgtggtcgcatctctacaactgtgccctgcagtgctggtgga
ccctccagtggtgacaatatgttcgatatctccgtcatacagaatctatcaatgcctctc
caaccagtggaatcgactgggaagagggtacctcttgggcagaggaaactttcctgtgat
gaggaatgtgcaaaaatggagagaaaaagggtccttgctgaagcatttgacattacccct
cccaatctggatgcattacattttggtgagaacacaagtgcgtcagatttgctttctgat
cttttccgacgcgagccaaagtgggtgctggccatagaggagaggtgcaagttccttgtg
cttgggaagacaagaggcaattcttcaaataatgtcaaagtccatgttttctgtcacatg
gtgaaggataagagggatgctatcaggctcatcgcagataggtggaagctttctgttcag
gcggttggttgggagcccaagcgttttgtcactgtccatgtcacacccaagtcgaaggtg
cctgctcgcgttcttggctcgaagcctggtgtccctgtctcagcttcacatccttacttt
gatcccctggtggacatggatccgaggctggttgttgcaatgctggacctgccaagggat
gctgatgttagctctctagtcttgagatttggtggggagtgtgaattggtttggctgaat
gacaagaatgccttggcagtcttcagtgatccagctagagcagcgacagcgctgaggcgg
ctagattatggctctgcttaccagggtgctgcaatgttttgcccaagcagcagcactcag
gcctcctcgtcaggcaatatatgggttgcaggacagagagatggagggttggctgcaaag
ggaagtgcaaatccatggaagaaagcctctacctcagagcccgacccatctggagactgg
actgtgcttggtcaagctccagggacaagtgtgcttgatcaagctccagggtcagtgtgg
aggcggggtgatactgcttctcaagtcatgggtacgaatcgatggaatgctctggagtct
gatgctgccacaagcttggggacatcgaacaagcataagccacctcctcgcagtgaagct
ggatcaagcgcctccgctcctcgtactggtgctggatccagtgcagaaacaagcgctagg
caatctgtgagcaagctgcagccggacattgaagtggatgactgggaagaatcctgtgag
tga
DBGET
integrated database retrieval system
