Brachypodium distachyon (stiff brome): 100843698
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Entry
100843698 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100843698 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100843698
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100843698
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WDR55
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100843698
NCBI-ProteinID:
XP_014751891
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Position
1:58533589..58538257
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AA seq
501 aa
AA seq
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MPPKELPGFYYDAEKNRYFPITGPIPGAAKRRRPPSPPPPPLADPPLTRRRKRVTQSELL
RAREMYGGGVMFSSGNSKCTFRQQCQHAQASQPLGWSYQGTSSMADKAVEELRTVVQTPS
GLRESKVLVTGSINGTVRLFGLGTALQNFEDEVEYLSELAWTPLRKLKVAMKSGLANIWS
PETAFSNFSSSITCIKKFGHKFRDAATTYSSVGRALVATLGSRGSGGSLYMIDLSLTTDL
AMVSLNAYGKIERLGSYNRTVWTADCSSDGTQVALGANNGAALLNLEKRSLSWMYHCKSD
VLSQQFMHSGNVVLCGLRNGSIVAIDVRQRHRNFPTGLASPGTARRTVPMLPATHQADKA
KSTRAISMSSAVCSLVALSSDENYFLGSSMDGSIKLFDLRLIQKGAVQSYVGHVNSHTHL
PLAVDPSETLLMSGGEDSTVRIWSIKTGEQVFEKRVADTLFTALCWPESGLDVDRSSLFD
LRHSWGAWMGSRDGLYYMHGT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaaagagctgccggggttctactacgacgcggagaagaaccgctacttcccc
atcacgggccccatccccggcgccgccaagcgccgccgtcctccttcccccccgccgccg
ccgcttgccgaccctccgttaaccaggcgcaggaagagggtcacgcagtcggagctgctc
cgtgccagggagatgtacggcggcggcgtgatgttctcctccgggaacagcaagtgcacc
ttcaggcagcaatgccagcacgcgcaggcatcccagcccttgggttggagttatcaaggc
acgagctccatggctgataaggcggtagaggaactgcgcaccgtggttcagacgccgagc
gggctgcgagagtccaaggtgttagtaaccggcagcatcaatggtactgtcagattattc
ggattagggactgctctgcagaactttgaggacgaggtggagtatttatctgagcttgct
tggactcccttgcgaaagctgaaagtagcaatgaagtctggacttgcaaatatctggtca
cctgaaacagccttctcaaacttctcatccagtataacttgcatcaaaaagtttgggcac
aaattccgtgatgcagccaccacctattcgtcagttgggcgagcattggtggctactctt
ggatccagaggatccggtggttctctttatatgatagatctgtcacttactactgacctg
gcaatggtctcactgaatgcctatggaaaaattgaacggcttggttcatataaccgtaca
gtgtggaccgctgattgtagttcggatggcacacaagtagctctaggtgcaaacaatggt
gctgcattgcttaatttggaaaaaagatcattatcatggatgtatcactgtaaaagtgac
gttctttcccagcaatttatgcactcgggaaatgttgtgctatgtggcctacgtaacggg
agcatagtcgctatcgatgtgcggcaaaggcaccgtaatttccctactggtctagcttca
cctggcactgctaggaggacagttcccatgctgcctgcgacgcaccaggctgataaggct
aaatctacaagagctatttctatgtcttcagcagtttgcagcttggttgctctgtcatca
gatgaaaactacttcttagggagctccatggatggatcgatcaagctatttgatctccgt
ctcattcagaagggggctgtccaatcttatgtgggccatgtgaattcacacactcattta
ccgctcgctgttgatccatctgaaaccctacttatgtcaggaggggaggactctacagtt
cgtatttggagcatcaagacaggcgagcaagtattcgaaaagagagtggctgacactctc
ttcaccgcactttgctggccagaaagtggccttgacgttgatcgttcttcattatttgat
ctacgacacagctggggggcttggatgggatcgcgtgatggcctgtactacatgcatggt
acataa
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