Brachypodium distachyon (stiff brome): 100843717
Help
Entry
100843717 CDS
T01717
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00330
Arginine and proline metabolism
bdi00480
Glutathione metabolism
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
bdi04148
Efferocytosis
Module
bdi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100843717
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100843717
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100843717
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100843717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
100843717
NCBI-ProteinID:
XP_003578562
UniProt:
I1ISF0
LinkDB
All DBs
Position
4:41963557..41965508
Genome browser
AA seq
414 aa
AA seq
DB search
MVGSSGPMQAVLTAPGVKDRKVHAFKRDALKDKDAVAALMHSIAAPAGTARSAFFVLDLA
RLVDLYSAWRRALPDVRPYYAVKCNPEPAMLGALAALGAGFDCASRAEIEAVLAHGVEPG
SIVYANPCKPEAHLEYAASVGVNLTTYDTEEEVAKVKRCHPDCELLLRIKGPDNDEAKID
LGTKYGAHAEEVVPLLRAAQRAGLTVAGVSFHVGACTSRTDVYHDAIRASRAAFDAAAAL
GMPPMRVLDIGGGFMADASFGRAAAAIKDALAQHFGELLPCVEVIGEPGQYFGETVFTLA
ARVIGKRARGEARQYWIDDGLYGSLSCALMGDYVPRPRPLLAAPRPGGEKTYASTVFGPT
CDSRDKVVSGYQLPEMSVGDWLVFDGIGAYAASSGSNFNGFLMSDIKTYLAYST
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagcagcggcccaatgcaggcggtgctgacggcgcccggggtgaaggacagg
aaggtgcacgcgttcaagcgggacgcgctcaaggacaaggacgccgtcgcggccctcatg
cactccatcgccgcccccgccggcaccgcccggagcgccttcttcgtcctggacctcgcc
aggctcgtcgacctgtacagcgcctggcgccgcgcgctccccgacgtgcggccctactac
gccgtcaagtgcaaccccgagccggcaatgctcggcgcgctggccgctctcggagcaggt
tttgactgcgccagccgcgccgagatcgaggccgtcctcgcgcacggggtcgagcccggg
agcatcgtgtacgccaacccgtgcaagcccgaggcgcacctcgagtacgcggcgtccgtc
ggcgtcaacctcaccacctacgacaccgaggaggaggtggccaaggtcaagcgctgccat
ccggactgcgagctcctcctccgcatcaagggccccgacaacgacgaggccaagatcgac
ctgggcaccaagtacggcgcgcacgccgaggaagtcgtgcctctcctgcgcgccgcccag
cgcgcgggcctcaccgtggcgggcgtctccttccacgtcggggcctgcacttcccgcacc
gacgtctaccacgacgccatcagggcatcccgcgcggcgttcgacgcggccgccgccctc
ggcatgccgcccatgcgcgtgctcgacatcggcggcggcttcatggcggacgcctcgttc
ggacgcgcggcggcggccataaaggacgcgctcgcgcagcacttcggcgagctcctcccg
tgcgtggaggtgatcggcgagccggggcagtacttcggcgagaccgtgttcacgctcgcg
gcgcgcgtcatcgggaagcgcgcgcgcggcgaggcgcggcagtactggatcgacgacggg
ctctacggctccctcagctgcgcgctcatgggcgactacgtgccgcgcccaaggccgctg
ctcgccgccccgcgccccggcggagagaagacgtacgcctcgacggtgttcgggccgacg
tgcgactcccgggacaaggtggtgagcgggtaccagctgccggagatgagcgtgggggac
tggctcgtgttcgacggcattggcgcctacgccgcctcgtcagggtccaacttcaacgga
ttcttgatgtccgacataaagacatacttggcgtactcaacctag
DBGET
integrated database retrieval system