Brachypodium distachyon (stiff brome): 100843773
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Entry
100843773 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100843773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100843773
03036 Chromosome and associated proteins [BR:
bdi03036
]
100843773
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100843773
Coactivators
SAGA/TFTC/STAGA complex
100843773
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100843773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
100843773
NCBI-ProteinID:
XP_010235784
UniProt:
I1IC60
LinkDB
All DBs
Position
3:complement(51424753..51434573)
Genome browser
AA seq
794 aa
AA seq
DB search
MASPPPEAGENVGVPSSSGTLPQDISDVSKSIVGQPQAAEHEGSSQTSEQAGQQHMDAAD
HLSQPNLVTGESISENFVQLEQHHYQPEQEQSLSENQLQQADTNSFQLSEKGTDYAGQQS
FTGSMEDVAQPSGVQQQANPMVGQRAPPSAPDTRKRGYQPSIPFNMLIPILQAHLDKDKD
MQLQSVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRNNQGNASQTS
TQQSPASGSAKLHNQQVRMPTPPNQGLKSQASSSPQTFVPLPGTQMQSSVHYFVHDNSVQ
NPDAKGMHAIPNRPPSINPPIPLQTSNKPQHSTQVQQALPHLYGTTNPPPQAYPRPISGS
MPLRPQSSASDIRPALHSHGMVAAKLGTVPTHPTMQHNASARQIQQSKDTKTNSLNPKAN
TKQNSESAGKARMVGTGGPSAKLHGKQAPPNTSTPPATRTNKKSGVQKKSLEMAGSAPSP
SSKRQKTSGAFQEQSIDQLNDVTAVSGVNLREEEEQLLSAPKEENLVSEAARKIVQEEEE
NLFLQKGPLLKKLAEIILKCNLKNASADVESCLSMCVEERLRRFISTLIRVSKQRIDTEK
TSHRLVITSDVGRQILQMNQKAKDEWDKKQAETDKNKKQTEEDGNVGAEMDKEKEESRPK
NAKPNKEEDDKMRTTAANVAARQAVGGSDMLSKWQLMAEQARQKRAPVPRPSHITGKGSA
EHNEASKRSHFAAFGTGGMKSQGRGTFAERHSHGPQRTVSVKDVISVLEREPQMTKSRLI
YRLYERLPGESTTD
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccgccgccggaggccggagagaacgtcggagtcccatcatccagcggtact
ttgccccaggatataagtgatgtgtccaaatctatagttggtcagcctcaagcagcagag
cacgaaggaagtagccagacaagcgaacaagcagggcagcaacatatggatgcagcagat
catttatctcaaccaaacttggtaactggagaatccataagtgaaaactttgtacaacta
gagcaacaccattaccagccagaacaagagcagtcactttccgagaatcaactgcaacag
gcagatacaaatagctttcagttgtctgaaaaaggaacagactatgctggtcagcagagt
tttacaggctcgatggaagatgttgctcaaccttccggagtccagcagcaagcaaatcca
atggttggtcagcgagcaccacctagtgccccggatacaaggaagaggggatatcagcca
tctataccatttaatatgctgattccaatcctacaagcacatcttgataaagacaaagat
atgcagcttcaatctgtatgggcaaaacttaggcgtaatgaagtccataaagatgacttc
ttaagagtcataaggaatattgttggggatcaaatgctcaagcaggcagcccataaagtt
tttgcacagatgcaagcccaggcacaacggaataaccagggaaatgcatctcaaacatct
acgcaacagagtcctgccagtggatcagcaaaactgcataatcagcaagttcgcatgcct
accccacctaaccagggcctgaaaagccaggcatcatcctcaccacagacctttgtgcca
cttccaggcacacaaatgcaaagcagtgtgcattattttgttcatgataattccgtccaa
aatccagatgcaaaggggatgcatgctattccaaatcgaccacctagtatcaacccacca
attccactgcaaacaagtaacaaaccgcagcattccacacaagtccagcaagccttgccg
catttatatggaaccactaaccctcctccccaggcataccctcggccaatcagtggttca
atgcctcttagaccacagagttcagcatctgatatacggcctgccttgcattctcatgga
atggttgctgcaaaacttgggacggttcctactcatccgacgatgcaacacaatgcatct
gcacgccaaatacaacaaagcaaggacacgaaaaccaattctttgaatccaaaagctaat
acaaaacaaaattctgagtcagcaggcaaggcccgcatggttggcacaggaggtccttcg
gcgaagttgcatgggaagcaggctccacctaacacatcgacaccacctgccacaaggact
aataagaaatctggtgtccagaagaaatcattggaaatggctggctctgcaccatcacca
tctagcaaaagacaaaagacatccggagccttccaggaacaaagcatcgatcaacttaat
gatgtcacagctgttagtggtgttaatcttagggaagaagaagagcagctgctctctgcc
cccaaggaagagaacctagtctcagaggcagcacggaaaattgtacaagaagaagaagaa
aatctctttctgcagaagggccctctgctgaagaaactagcagaaatcattcttaaatgt
aacctgaagaatgctagtgctgatgttgagagctgcttatcaatgtgcgtggaggagcga
ttgcgaagattcataagtactctcataagagtttcaaagcagagaatcgacacagagaag
actagtcatcgactagttattacttcagatgtcggccgtcaaattttgcagatgaaccag
aaagctaaagatgaatgggacaaaaagcaagcagaaactgacaagaacaagaaacaaact
gaggaggacggcaatgttggtgcagagatggacaaagaaaaagaggaaagtcgtccaaag
aatgcaaagcccaacaaagaagaggatgataaaatgagaactacagctgcaaatgttgct
gcccggcaggcagttggaggaagtgatatgctgtcaaagtggcagctgatggctgaacaa
gctaggcagaagcgagcaccagttccaaggccatcacatataactggaaaaggttctgca
gaacacaatgaagcttcaaagaggagccattttgcagcctttggaactggaggcatgaaa
agccaaggcaggggtacatttgcggagcgtcattcacatgggccgcaacgaactgtttct
gtgaaggatgtaatcagtgtcctcgagagagagcctcagatgacaaaatcgcggctgata
tatcggctgtatgagcgattgcctggagaatctaccacagattag
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