Brachypodium distachyon (stiff brome): 100843935
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Entry
100843935 CDS
T01717
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100843935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100843935
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100843935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100843935
NCBI-ProteinID:
XP_014753007
UniProt:
A0A0Q3JYM2
LinkDB
All DBs
Position
1:66713803..66717520
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AA seq
526 aa
AA seq
DB search
MGAADLVLKASCDACGSRSEVYGTSCRHATLCRSCGAARARSRARCAVCAAPIINLIREY
TVRVDTAAEKALSIGRFTTGLPPFSKERIAGNKWSLRKDGLQGRQLTANMREKYYKRKPW
ILEDETGEYQYQSQLEGTQSATATYYLLMMHGNELHAVPVGSWYNYSKIAQYKQLTLEEA
EEKMNRRRSNATGYERWMMRCATHGAAAFGSDVKKLEDVDGGATSGVQSKKRNKDGDDNH
CDKGEENEEEGVASKNADGLATKGMEDEEEGGKEDFDLDGEIEIGEDWEHEEFFTDDDEA
LDIDPEERPDFTENPAPPEIKQDDNGNEQGAGGLSKAGKELKKLLRRAAGQSESGDDEDT
EEDESPSPVLAPELKTEFKSEPQENNPVKLTAAGLDISIPPASRPNKKRRTRCDDAKKCN
GAALKKSNIESETKTLGVKEEPPSSSEPISKEFASASSTNISTITEEEVRRLLAIGPVAM
EDFVSRFEPRFRTQEDKKYFFDIVSKISVVDKSMGRKYIHLQKEYK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgccgacctggtgctgaaggcgtcctgcgacgcttgcggctctcggtcagag
gtctacggcacgagctgccgtcacgccaccctctgccgctcctgcggcgccgccagggcg
cgctcccgcgcgcgctgcgccgtctgcgccgcccccatcatcaacctcatacgggagtac
actgttcgggtcgataccgccgcagagaaggccctttcgataggcagattcaccacaggc
ttgccgcctttctcgaaggagaggattgcggggaacaagtggtctcttcgtaaggatggc
ctgcaaggacgacagcttactgccaatatgcgggagaaatactacaaaagaaaaccatgg
atattggaagatgaaacaggtgaatatcagtaccaaagtcaacttgagggaacacaatct
gcaactgctacatactatttgttgatgatgcacggcaatgagttacatgctgttcctgtt
ggttcctggtataactacagtaaaattgcacagtacaaacaactgactttggaagaagct
gaagagaagatgaatagaaggagaagcaacgcaactgggtatgaacgatggatgatgagg
tgtgcaacacatggagctgccgcctttggttcggatgtgaagaagcttgaggatgttgat
ggcggggcgacaagtggggtccaatccaagaaaagaaacaaggatggtgatgacaatcac
tgtgataaaggcgaggagaacgaagaagagggagtggcaagcaaaaatgcagatgggctt
gcgacaaagggcatggaggatgaggaagaaggcggaaaagaagactttgatttggatggt
gaaatcgagataggtgaagattgggagcatgaagagttcttcactgatgatgatgaggct
ctggatattgacccggaggaaagacctgatttcaccgaaaaccctgctccaccagaaatt
aagcaggatgataacgggaatgaacaaggagctggtggcctgagcaaggccggtaaggaa
ctaaaaaagctgctccgccgtgccgctggacaaagtgagtccggtgacgacgaagacact
gaagaagatgagtcgccatcgccagtacttgctccagaactgaaaactgaattcaaaagt
gaaccacaggaaaacaaccctgtcaaattgacagcagcaggacttgatattagcattcca
cctgcatccaggcccaataaaaagaggagaacaaggtgtgatgatgcaaagaagtgtaat
ggtgcagcgctcaagaagtcaaacatagaatctgaaactaaaacattaggtgtcaaggag
gagccaccctcttcctcggaacctatttcaaaagaatttgcttcagcaagtagtacaaat
atatctacaattacagaggaggaagtcaggagattacttgcaattggtcctgtggcaatg
gaagattttgtctccagatttgagccaagatttagaactcaagaggacaagaaatatttt
tttgacattgtgagtaaaatttctgttgtggataagagcatgggacgcaaatatattcac
cttcagaaggagtacaaatga
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