Brachypodium distachyon (stiff brome): 100844070
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Entry
100844070 CDS
T01717
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100844070
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100844070
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100844070
04121 Ubiquitin system [BR:
bdi04121
]
100844070
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100844070
Peptidases and inhibitors [BR:
bdi01002
]
Metallo peptidases
Family M67
100844070
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Others
Others
100844070
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
100844070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
Ribonuc_red_lgC
Motif
Other DBs
NCBI-GeneID:
100844070
NCBI-ProteinID:
XP_003569497
UniProt:
I1HQ32
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All DBs
Position
2:45922232..45926671
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AA seq
281 aa
AA seq
DB search
MSSARFESSGRKWQTHSTAGSKTMYLATADAKQIAHCQLNLPRAIDPNVGSYPVKHHYPS
PIVSWIEDLSSFSDVSFSDNAEYVDDQSRPSVGQSSASNNLHDMQISVRLTDEFMELAKE
NTSNNLETCGILGASFSDGTYYVTMLIIPKQDATAHSCQAFNEEEIHAILSEQSLYPAGW
IHTHPSQTCFLSSIDLHTQYSYQVMFPEAVAIVAAPTDPTRSYGIFRLTDPGGMDVLREC
SESGFHTHRETTDGGPIYETCSKVHFKPNLRFEIVDLRSGA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaagattcgaaagcagtgggcgaaaatggcagacacattcaacagcaggt
agtaaaacaatgtatttagctactgcagatgctaaacagatcgcccactgccaacttaat
cttccgagagcaatagatcccaatgttggttcctaccctgtgaagcaccactacccgtct
cctattgtttcctggatagaagacctttcgagctttagtgatgtttcttttagcgataat
gccgaatatgtggacgatcaatcaaggccttcagtggggcagtcttctgcatccaacaat
ttgcatgacatgcaaatctcggtaagactgacagatgaattcatggaacttgcaaaggag
aacacaagcaataatttggagacctgtggaattcttggtgcttcatttagtgatggaact
tactatgtgacaatgttgatcataccaaagcaagatgcaactgctcattcatgtcaagct
tttaatgaggaggagatacatgccatattgtcagagcagtcactttaccctgctgggtgg
atacatactcacccttcacaaacatgcttcctatcatcgatcgatttgcatactcaatac
tcttaccaggttatgttcccagaagctgttgccattgtggctgctcccactgatcctact
aggagctatggaatattcaggctgacagatccaggagggatggatgtgctcagggagtgc
agcgagagtgggttccacactcaccgagagacaacggatggcggtccaatatatgaaacc
tgctccaaggtgcacttcaaacctaatttgcggtttgagattgtcgatctgcgttctggt
gcgtga
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