Brachypodium distachyon (stiff brome): 100844162
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Entry
100844162 CDS
T01717
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100844162
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100844162
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
PROPPIN
Beta-prop_IFT122_1st
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WDR54
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
PQQ
Beta-prop_DCAF4
WD40_2
Motif
Other DBs
NCBI-GeneID:
100844162
NCBI-ProteinID:
XP_003566579
UniProt:
A0A0Q3IP06
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Position
2:36507555..36513839
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AA seq
473 aa
AA seq
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MAAPSRLRGRRLLGREVEREHEPFTIDEDVSHLTRIRSEPCPRTRAAMHRAGRKKRAVSA
FEMLSARESGRSGGGGFSQADRAYAAGKHLPAKGPWCVEDMDSEAYVSQFSSDGSLLVAG
FRGSRIRVYDVDKGWKVHKNISCRSMRWTVSDIALSPDQRYLAYSSLSPIVHIVNVQSAG
RDSDANVTEIHEGLEFCDDDEYSFGIFSVKFSKDGREVVVGNNDSSIYVYDLGANKVSVR
IRAHEADVNTVTFADESGNVLYSGSDDNHCKVWDRRCLVREKPAGVLTGHLDGITCIDSR
GDGRYLISNCKDQTIKLWDVRKMSSTVEGRPPRLYDWDYRWMSFPSNARYYKHPNDQSLA
TYRGHSVLRTLIRCYFSPVHSTGQRYIYTGSSDESVYIYDVVTGEVIKKLSWHGSIIRDC
TWHPYRPTLVSSSWDGYLARWEASGDNEDPSMLTLDEQRTSPYHQMYGMSFAM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccatccaggttgcgggggaggcggctgctgggcagggaggtggagcgtgag
cacgagccgttcaccatcgatgaggacgtgtcccatctcaccaggatccgatcggagccg
tgtccccgcactcgcgctgccatgcaccgtgccggccggaagaagagggccgtctcggct
ttcgagatgctgtcggcgagggagtccggccgctcggggggcggcgggttctctcaggcc
gaccgcgcttacgccgccgggaaacacctcccggcgaaaggcccgtggtgcgtggaagac
atggatagcgaggcgtacgtctcgcagttctctagcgatggctcgttgctcgtcgctggg
tttcggggaagccgcatcagagtttacgatgtcgacaaagggtggaaggttcataagaat
ataagctgcagaagtatgcggtggaccgtttcagatattgctctctcgcctgaccagcga
taccttgcctattccagtttgtcgcctattgttcacattgtaaatgtgcagagtgctgga
agggattcggatgctaatgtcactgaaattcacgaaggtttggagttctgtgatgacgac
gaatactcttttgggatattctctgtaaagttttcaaaagatggtcgagaagttgttgtt
gggaataatgatagctcaatatatgtctatgatcttggagccaataaagtatcagtccgc
atccgtgctcatgaggctgatgtcaacacggtgaccttcgctgatgaaagcggtaatgtg
ttatactctggaagtgatgataatcactgtaaggtgtgggacaggcgttgccttgtaaga
gaaaaaccagcaggtgtattgacaggtcacttagatggaattacatgtattgatagccgt
ggcgatgggcgttatttaatctcgaactgcaaggatcagactattaaactttgggatgtt
aggaagatgtcctccaccgtagaaggacgtccaccaagattatatgattgggactacaga
tggatgtcattcccatcaaatgccagatactataagcatccaaatgatcagtctctggcc
acatacaggggtcattcagttctgcggacacttatccgctgttacttctcaccagtgcac
agcacgggtcagaggtacatatacacgggatccagtgacgagtctgtctatatctatgat
gtggttaccggggaggtcatcaaaaagctctcatggcacggatcaattatcagagactgc
acttggcatccttaccgcccgacgctcgtcagctcttcctgggacggctatctggccagg
tgggaggcatcaggcgacaatgaggacccctcgatgctcacgctcgacgagcagaggact
agcccttaccaccaaatgtatgggatgtcctttgctatgtaa
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