Brachypodium distachyon (stiff brome): 100844247
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Entry
100844247 CDS
T01717
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100844247
03015 mRNA surveillance pathway
100844247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100844247
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100844247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
SpoIISA_toxin
Motif
Other DBs
NCBI-GeneID:
100844247
NCBI-ProteinID:
XP_003563675
UniProt:
I1GXL0
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All DBs
Position
1:complement(32654685..32669224)
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AA seq
606 aa
AA seq
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MAFTRVELRCPKTLDPCTSWTLRDVLTEFDAFEATRLAAPPMPLKQPLKWADGGSRREKA
FVMRVEEEGDTEDEDDDSDEDARALVAHGARFSCNDIESSDSEESGDELDGRVTPYHLME
KRSLEKSILLELEREHRLKIQEEVRSKLSALEVCHQNEIQRTISALARLQKYAESRKEID
RRLDVHFQRKIAEILDKHLSMVQRDHKQKSQIVERRIRDDAAIEEAKRREQAMKEDKIKQ
ERTRQEAEARHKAAAKLAAEAQKAAYEAAQKEAAETEAAKLRAAAVSQNSVAHATTVNKE
EIKSELPGIKVFADSSALEAESRRHALHDQVPSNIYLSKEFSKYDRQIGKSISKLMPTTD
SVKARASELIKALDGHDCPRPIACRLFADKIISIVKSRNPKDKTFGNLAFACGYVMLLVT
NQVPEAMDYLLAEFHKVCVYTVPKHMHALNAHARNRDYYRLIGYQEENGQLESTEKYLTN
IAAYVKLYAATIQTEIKGVHHPHGLAEGWKWLAMFLNTLPATTATACALHAFLKMAGFAL
HKKYGSQFMKVLDVISRCFLPVLKEQGSKVQPEAVNNLQNYLNDKIYLEEPEGQYLAQQL
LSKVFM
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccttcacgcgcgtggagcttcggtgccccaagacgcttgacccctgcacgagctgg
accctcagggacgtcctcaccgagtttgatgcatttgaagccacccgtcttgccgcgccg
cctatgcccctcaagcagccgctgaagtgggctgatggtggcagcaggagggagaaggct
tttgtcatgcgggttgaggaggaaggcgacacggaagacgaagatgatgacagtgatgag
gatgcccgggctcttgtagcacacggagcgaggttttcatgtaatgatatcgaatcaagt
gactctgaagaatcaggggatgaattagatggtagggttacaccataccacctgatggag
aaaaggagcctggagaagagtattctacttgagctggaacgcgagcatcgtctcaaaatt
caagaggaagttagaagtaagttatctgcattggaggtatgccaccaaaatgaaatccag
agaacaatctctgcacttgctcgacttcagaaatacgcagaatcaaggaaagagatagat
agaaggctagatgtccacttccagaggaaaattgcagaaatactcgataaacacttgtct
atggtccaaagggaccataaacaaaaatcccagattgtagaacgtagaataagagatgat
gcagctattgaggaagctaaaagaagggagcaagctatgaaggaagataaaataaagcag
gaaaggaccagacaagaagcagaggctaggcataaggcagctgctaaattagcagctgaa
gcacaaaaggcagcatatgaggctgctcagaaggaagctgcagaaaccgaagctgctaaa
ttgagagcagcagcagtttctcagaacagtgttgcacatgcaacaacggtaaacaaggaa
gaaatcaaatcagaactaccagggatcaaagtttttgctgatagttctgcattagaagca
gaatcacggaggcatgcactacacgatcaagttccatcaaacatttacctcagcaaggaa
tttagcaaatatgaccggcaaattggaaaatccatcagtaaacttatgccaactactgac
agtgtcaaagctagagctagtgagcttattaaagctttagatggacatgattgtcctcgt
ccaatcgcttgtcgtttgtttgcagacaagattatttcaattgtcaagagtcgaaaccca
aaggacaaaacctttggaaatttggcctttgcctgtggatatgtcatgctgctagtcact
aaccaggtaccagaggcaatggattatcttctagcggagttccacaaagtttgcgtatac
acagttccaaagcatatgcatgctttaaatgcacacgcacggaacagagattactacaga
ctgattggctaccaggaagaaaatggacaacttgagagcactgagaagtatttgaccaac
attgctgcatatgtgaaactgtatgctgcaacgattcagacagaaatcaagggtgtgcat
catccacatggcttagcagagggatggaaatggcttgccatgttcctcaatactctccct
gccaccacagccactgcttgtgcgcttcatgctttcctcaagatggctggttttgcactt
cacaagaaatatggatcgcagttcatgaaagttctagatgtaatatcacggtgctttcta
ccagttttgaaagaacaaggctcaaaagttcagccagaggctgtcaataatttacagaat
tatctgaatgacaaaatttatctcgaggagccagaagggcagtacctcgcccagcagctg
ctatctaaagtgttcatgtga
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