Entry |
|
Name |
(RefSeq) nucleolar protein 6
|
KO |
K14544 | U3 small nucleolar RNA-associated protein 22 |
|
Organism |
bdi Brachypodium distachyon (stiff brome)
|
Pathway |
bdi03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100844306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:bdi03009]
100844306
Ribosome biogenesis [BR:bdi03009]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100844306
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
4:complement(45673876..45682168)
|
AA seq |
1051 aa
MASADYSLDRKLSALLTEARPSAASLRAAGEAADAVAALVKSVPPQQANPTAASGFVADL
GLLAEAHKLAFDFRAPEVVRLAGSHAAGGSVARPDVAADLLVRLPKECFHEKDFLNHRYH
VKRCLYLCVIEKSLLSSPLICKVSWSTFQDEARKPILHVYPATEIAELPGFYVRIIPTAS
SLFDVSKLNLSTRNNVRAYTKDGINQPTPKYNSSILEDMFLEENAESISSTFANWKNLQE
ALVLLKVWARQRTSIYTHDCLNGYLISAVLVFLTMDSGGSIINRSMTTRQIFRVAINFFA
TSKMWPKGLVMQPMKKRTITKEDIAHLLKTFDVVICDVSGHVNLAFRMKKTAFLELQDEA
ASALNCLDKCRDGGLEELFMTKVDFGAKFDSCVRINLKGNSKVTALSFCLDDESWRVLEN
NVQSLLQQGLTDRTKMIRVLWRSTPSEWNIKDGFSKFGSSPVIVGIMLSSLEKSYRLVDI
GPNPENRDEAVKFRKFWGEKAELRRFKDGVIAESTVWETEPWKRHTIVKRIADYVLTKHL
LLQKEDLVHVVDQLDFCLLVAGQDPVSSSGDLLIAFDTLSKQLRLLDDVPLKISTVQPLD
PAFRHTSVFPPEPHPLAYEKSSQRLPNFAATCVRSLEVMIQLEGSGNWPLDPVAMEKTKS
AFLLRIGESLEGRGMFVTASEDEVNVFTSGYSFLLKIFHERGLVQKQAGDVNTQSAPSED
KELFLRSQHSSMINGLHGRYQVYGPVVRLAKRWMSAHLFSSFISEEAVELFVAYLFLKPF
PFHAPSSRVVGFLRFLRLLSSFDWTFTPMVVDINNDFNLKDEKDINENFMLSRKSYEQNP
HDVEPAMFLATSYDKASEAWTKHSPSKSVLKRMAAYAKSSAELLTNLIIHGQSGQYTWEC
LFRTPLSNYDAVVLLHQEKLCRPHHVLFPAETPNGKLVIRGNPSNSFHPYMSLNSTVMRS
LHDARDKLLVNFDPTAYFLRDLKCAFPVTFKLWYDSNGGDAVGLTWENSKKRGRDEADEA
MPDPTSILKEVGDVGKGLVRGVYLLKAPKLQ |
NT seq |
3156 nt +upstreamnt +downstreamnt
atggcctccgccgactactccctcgaccgcaagctctcggcgctcctcaccgaggcgcgg
ccgagcgccgcctcgctccgcgccgccggagaggcggccgacgccgtcgcggcgctcgtc
aagagcgtgcccccgcagcaggcgaatcccacggccgcctccgggttcgtggcggacctg
ggcctactcgcggaggcacacaagctggcgttcgacttccgtgccccggaggtggtgcgg
ctcgccgggagccacgcggccggcggctccgtcgccaggcccgacgtcgccgccgacctc
ctcgtccgcttgcccaaggaatgcttccatgaaaaggatttcctgaatcatcggtaccat
gtaaagaggtgcctttacctctgtgtcattgagaagagcttgctttcttctcctttaata
tgtaaggtttcatggtccaccttccaagacgaggcacggaagcctattctccatgtatat
ccagcaacagaaattgcagaacttcctgggttctatgtcaggataatcccgactgcgagc
tctttgttcgatgtctcaaagctgaatctgtcaacacgaaacaatgtccgtgcatataca
aaagatggcataaaccaacctacaccgaaatacaatagcagcatattggaggatatgttt
ctggaggaaaatgccgaatctatcagtagcacctttgcaaactggaaaaacttgcaagag
gcattggttttactgaaggtttgggcacgtcaaagaacttcaatatatacacatgattgc
ctcaatggatacttaatatctgccgtgctcgtgtttcttactatggactctggaggaagc
ataattaatagatcaatgaccacaagacaaattttccgtgttgcaatcaatttctttgca
acttctaagatgtggcctaagggcttggtgatgcagccaatgaagaagcgtacaatcacc
aaagaggacattgctcatctcctgaaaacatttgatgttgtcatatgtgatgtatctggc
cacgtcaatctggcatttcggatgaagaaaacagcttttctagagcttcaagatgaggca
gccagcgcacttaattgccttgacaaatgcagagatggtgggttagaagagctttttatg
actaaggttgattttggtgctaagtttgactcatgtgtgaggataaacttgaaggggaac
tccaaagttactgcattaagcttctgcttggatgacgaatcttggcgagtacttgaaaac
aatgttcagtccttgctgcaacaaggacttacagatagaacaaagatgatccgtgtcctg
tggagaagcactccttctgaatggaatataaaggatggcttctcaaaatttggtagcagc
ccggtgattgttggtataatgcttagctcgttggagaagagttatcgtcttgttgatatc
ggtcctaaccctgagaatcgtgatgaggctgttaaatttaggaaattttggggagagaaa
gctgaactcaggaggtttaaagatggggttattgctgaaagcacagtttgggaaacagag
ccttggaagaggcacacaatcgtgaaaagaattgctgactatgtgcttacgaagcatttg
ctattgcagaaggaagatttggttcatgttgttgatcagctggacttttgcctcctggtt
gctggccaagatccagtgtcatcttctggagatttgctcatagcctttgatactttatct
aagcagttgcgtctattggatgatgttcctcttaaaatatccactgtgcaacctctagac
ccagcttttaggcacacttctgtgtttcctcctgaacctcatcccttggcgtatgaaaag
agttcgcagaggctgccgaattttgcagcgacttgtgttcgatctttggaagtcatgatt
cagctagagggatctggtaactggcctttggatcctgtagccatggagaaaacaaagtct
gcgtttcttttaagaattggtgaaagcctggagggtcgaggaatgtttgttacagccagt
gaagatgaggtcaatgtttttacatctggatattcattcttgctcaaaatatttcatgaa
agaggtttggtgcaaaagcaagctggagatgttaacacacaaagtgctccatcggaagac
aaggagctctttctgcggagccagcactctagtatgatcaatggtctgcatggtcgatac
caggtttatgggcccgtagtcaggctagcaaaaaggtggatgtctgcacatcttttttct
tcatttatctctgaggaggcagttgaactgtttgtcgcctacctatttttgaagccattt
ccattccatgccccttcttcgcgggttgttgggtttcttaggttcttgcggttgctatcc
agttttgactggacctttacacccatggtcgtcgacataaataatgacttcaacctgaag
gatgagaaggatatcaatgaaaactttatgctgagcagaaaatcttatgaacaaaatcct
catgatgtagagcctgcgatgtttctggccacatcatatgataaagcatctgaagcttgg
acaaaacattcaccaagcaagtcggttcttaaacggatggctgcttatgccaaaagcagc
gcagaactgttaacaaaccttataattcatggtcaatcaggccaatatacatgggagtgc
ctcttccggacacctttaagcaattatgatgctgttgtactcctccatcaagagaagctt
tgtcgtcctcaccatgttctttttcctgccgagactcctaatggtaagttggtaatccgg
ggtaatccaagtaattctttccacccttatatgtcactcaatagcacagttatgagaagc
ttgcatgatgcacgagataaacttttggtaaattttgaccctaccgcatacttcctgcgt
gacttgaagtgtgcattccctgtgaccttcaagctgtggtatgattcgaatggaggagat
gcagttggtcttacatgggagaactcaaagaagcgtggcagagatgaggctgatgaagcc
atgccggatccaacatctatactcaaggaggttggagatgttggtaaaggattggtgagg
ggtgtatatctcctcaaagcaccaaagcttcagtag |