Brachypodium distachyon (stiff brome): 100844572
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Entry
100844572 CDS
T01717
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100844572
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100844572
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100844572
Protein phosphatases and associated proteins [BR:
bdi01009
]
HAD phosphatases
Fcp/Scp phosphatases
100844572
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100844572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
100844572
NCBI-ProteinID:
XP_003569080
UniProt:
I1HMS8
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All DBs
Position
2:complement(38692753..38697087)
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AA seq
746 aa
AA seq
DB search
MAPHAAAAAAGTTRTTMNVATAVYRVQLALLDGAAASNEPLLHAAAAVLSRADYDDVVTE
RSIADACGHPPCASPLPAAAAAAAAPPRFHISLREHRVYDLEEARKFCSERCLVASAAFA
ASLPHDRPFGVPPDRLDALVALFEGGGDRPGLGFREVSSGKDKDEGRKLEIREKEAPGLG
EVTLQEWIGPSDAIEGYVPRHHPIPEGPMPEAKQRKTSRADQSRNKNLDSATSSSVEAPV
SSEVIAKKLNDMVLGDNTKTKKKQVCETPSKMFRPDEHGDMLLSCVTDSIAKQLEDVVLE
EKNDMKKERPTRASSRSRKSKPAKKPAGSDGHEVGFTSTIIMGDHVLAKMDQGPVGQYNF
ATSIADNQPSSSSSLSSSPTQYTARDLTGAYTEQLNKEFSKAVNLGKDEASDEKVRIVPK
SSLKAGGSKNKSQSVTWADENGSLLEISKEYVIHSDDKKHYKEDIDGSLRRESAEACAAA
LIEAAGAISLGTSEVEDAVSKAGIIILPDMLHQNQFKSDNGKNTVEKEISETDNGVVKWP
NKPVFLDTDMFEVDDSWHDTPPEGFNLTLSAFATMWATLFGWISRSSLAYVYMLDGSSVE
ELLISSGREYPQKTVSKDSQSSEIKRTLATCIGNALPVLTSNLRMQIPVSKLETTLGYLI
DTMSFVEALPPLRSRQWQLMVLVLLDALSVCRLPGLAPVMSDSKLLQKVLNSSQVSREEY
DSMVDLFLPFGRSVQTPPPSQPVQVP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccacgccgccgccgccgctgccgggacgacaaggacgacgatgaacgtggcc
acggccgtgtaccgcgtgcagctggccctcctcgacggcgcggctgcctccaacgagccc
ctcctccacgcggccgcggcggtcctctcccgcgccgactacgacgacgtcgtcaccgag
cgctccatcgccgacgcgtgcggccatcctccctgcgccagcccgctccccgccgcggcg
gcggcggcggcggcgccgccgcggttccacatctccctccgcgagcaccgcgtctacgac
ctcgaggaggcccgcaagttctgctccgagcgctgcctcgtcgcctccgccgccttcgcg
gcctcgctcccgcacgaccgccccttcggtgtcccgcccgaccggctcgacgccctcgtc
gcgctcttcgagggcggtggcgaccggccggggctagggtttcgggaggtctcctccggg
aaggacaaggatgaggggaggaagttggagattcgggagaaggaggcgcctgggcttggg
gaggtgacgctgcaggagtggattgggccgtcggacgccatcgagggctacgtgccgcga
catcaccccatccccgaagggccaatgccagaagctaaacagagaaaaactagtagagct
gaccagtccagaaataagaacttggattctgcaacttcatcttcagttgaagcaccagtg
agctcagaagtaatagctaaaaagttaaatgacatggtccttggtgacaacacaaagaca
aagaaaaagcaagtatgtgagaccccatcaaagatgttcaggccggatgaacatggcgat
atgttgttgtcctgtgtaacagattccattgcgaaacagctagaggatgtagttttggaa
gagaaaaatgacatgaagaaagagagaccaactagagcatcatcaaggtcacgcaagagt
aagcctgcaaaaaaaccagctggaagtgatggacatgaagtgggctttactagtacaatc
atcatgggggatcatgttttggcaaagatggatcaaggtcctgtgggtcaatataacttt
gcaacttctatagcagataatcagccatcatcatcatcatcattatcatcatcaccaact
caatatacagcaagagatttaacgggtgcttacactgaacaactgaacaaagaattcagt
aaagcagtgaacctcggaaaagacgaggcgagtgatgaaaaggttagaattgtaccaaaa
tcttcattgaaggctggaggatccaagaacaaaagtcagtctgtgacatgggcagatgag
aatggaagcctcttggaaataagtaaagaatatgtaatccattcagatgacaaaaaacat
tataaggaagacattgatggttcactaaggcgtgaatctgcagaggcttgtgcagctgcg
cttattgaggcagcaggagctatttctttaggcacatcagaagtggaagatgcagtttct
aaggcaggaatcatcatattgcctgacatgcttcaccagaatcagttcaagagtgacaat
ggcaaaaatacagtagaaaaggaaatatctgaaacagataatggtgttgtgaagtggcca
aacaagcctgtttttctagacacagacatgtttgaagttgatgattcttggcatgacaca
ccgccagaaggtttcaatttaactctgtctgcttttgcaacaatgtgggctacactattt
ggatggatatcccggtcatctttggcctatgtgtacatgcttgatgggagctctgtggaa
gaattgttgatttccagtgggagagaatatccacagaagacagtttccaaagatagccaa
tcatctgaaattaaaagaactttagctacttgcatcggtaatgcacttccagtgcttaca
tcaaatttgaggatgcaaatcccagtttccaagttggagactactctgggatacttgatc
gacactatgtcttttgttgaggcactgcctcctctgaggtcaaggcaatggcaattgatg
gtcctggtgctgctcgatgcactctctgtttgccggcttcctggtcttgctccagtgatg
tcagattcgaagcttctgcagaaggttttaaactcgtctcaggttagccgagaagagtac
gactctatggttgacctctttctcccatttggaagatccgtgcagacacccccaccaagt
cagcctgtacaagttccgtga
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