Brachypodium distachyon (stiff brome): 100844608
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Entry
100844608 CDS
T01717
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
bdi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100844608
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100844608
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100844608
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100844608
03036 Chromosome and associated proteins [BR:
bdi03036
]
100844608
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100844608
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100844608
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100844608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF2398
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
100844608
NCBI-ProteinID:
XP_003576786
UniProt:
I1ISD9
LinkDB
All DBs
Position
4:complement(41845432..41848436)
Genome browser
AA seq
482 aa
AA seq
DB search
MGAATEVARAAPLAAAKRRSTTLLHLLQLENPDGVFVFTLPPPSPEPEAETLIDKIGSCC
RVFAFSDAGEPASERDAKRERLSEVLDAVRSSSTSIDTKNKQQPAPGLDHRVMAALVKML
AANLFREMPPPPPSASCPLADAPAAIDEESPAVSLLPSWPHLQAVYDILLAMVAGAGDDD
ATKSLRHHLDRRFLASLVSLFASDDPRERDRLKTAYHMLYSKLTPDRAFMRRSMAAALLR
FAHHDSSSSSPAGVGELLEICGSIINGFAVPLKEEHRGFLLRVLMPLHRTRWLHAYHRQL
VYCVLQFVHKEPALVGAVVQGILRRWPVTNCQKEVLLIDELEEIVEVLQQDQFDALAVPI
CSRIARCATSCSSQVAERALYVWNNERFLELACSSSDGGATMERILPAFVASIEDNLERH
WSKCVRDVTGSVKALLQQMAPEMYARCAAGLAASRAEADADADARADRWRRIEAAAAANA
AT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggctacggaggtggcgagggcggcgccgctggcggccgccaagaggaggtcg
acgacgctgctgcacctgctgcagctcgagaaccccgacggcgtgttcgtgttcacgctg
ccgccgccgtcgccggagcccgaggccgagacgctcatcgacaagatcggctcctgctgc
cgcgtcttcgccttctccgacgccggcgagcccgcctccgagcgcgacgccaagcgtgag
cgcctctcggaggtgctcgacgccgtccgctcctcgtcaaccagcatcgacacgaagaat
aagcaacagccagcgccggggctggaccatcgggtcatggcggcgctcgtcaagatgctc
gcggcaaacctgttccgcgaaatgccgcccccgccgccgtccgcgtcctgcccgctcgcc
gacgcgcccgccgccatcgacgaggagtcgcccgcggtctccctcctcccgtcgtggccg
cacctgcaggccgtctacgacatcctcctcgccatggtcgccggcgccggggacgacgac
gccaccaaatccctccgccaccacctcgaccgccgcttcctcgccagcctcgtctccctc
ttcgcctccgacgacccccgcgagcgtgaccgcctcaagacggcctaccacatgctctac
tccaagctcactccggaccgcgccttcatgcgccgctccatggccgccgccctcctccgc
ttcgcccaccacgactcctcctcatcatccccggcgggcgtcggggagctgctcgagatc
tgcggcagcatcatcaacggcttcgccgtgccgctcaaggaggagcaccgggggttcctg
ctccgggtgctcatgccgctgcaccggacgcggtggctccacgcgtaccaccgccagctc
gtctactgcgttctgcagttcgtgcacaaggagccggcgctcgttggtgcggtcgtccag
gggatcctccgccgctggccggtcaccaactgccagaaggaagtgctgctcatcgacgag
ctggaggagatcgtcgaggtgctccagcaggaccagttcgacgcgctcgccgtgcccatc
tgctcccggatcgcgcgctgcgccactagctgcagctctcaggtggcagagagggcgctg
tacgtgtggaacaacgagaggttcctggagcttgcgtgctccagctccgacgggggcgcg
acgatggagaggatcctgccggcgttcgtggcgagcatcgaggacaacctggagcggcac
tggagcaagtgcgtgcgggacgtcacggggagcgtcaaggccctgctccagcagatggcg
cccgagatgtacgcccgctgcgccgcgggcctcgccgccagccgcgccgaggctgacgcc
gacgccgacgccagggccgaccggtggcggaggatcgaggcagccgcagccgcgaacgcc
gcgacgtag
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