Brachypodium distachyon (stiff brome): 100844729
Help
Entry
100844729 CDS
T01717
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100844729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100844729
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100844729
Prokaryotic type
Archaeal type
TFB
100844729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
100844729
NCBI-ProteinID:
XP_014751999
LinkDB
All DBs
Position
1:21788595..21790399
Genome browser
AA seq
439 aa
AA seq
DB search
MYDVANGLRYCKGCRRVTTVTVDPASGDTVCTECSLVLNERYVEESTEWRSFLNHGAPSD
ESRSRVGDPADHFFTNLQFGNAVAGPAPGNAQTNKALPRMRGSSAGGSGVAMPKTRGAAE
MYDVAHSLHYCKGCRRVTAITVDPSSGDTVCTECSLVLNERYVDESFEWRTFLNHGAPAD
ESRRRVGDPIAGPAPGDAQTNTALPRKRGGGAGGSCVAKPKTRGAAATAALDRALADAFH
AMDGMAERLGLATTVKDRAKDVLRKLEVAKVFRKGGKCRNRQALYAACLLMACRGEGTQL
TFKELASVTGDSATAGIKDTGRLVMLIRNHLGDQEGSGSALEMGAVVRAGDYLHRFGSLL
GMGQEELHAAQQAARRLEKDLDVRRNPGSIAAAVIYMAVERANAGKSIRDVSTATGVGEV
TIRDVYNKDLSPHADLLFG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgtggcgaacggcctgcgctactgcaagggctgccgccgcgtaaccacggtt
acggtcgaccccgcctccggcgacaccgtctgcaccgagtgctcgctcgtcctgaacgag
cgctacgtcgaggaatccaccgagtggcgcagcttcctcaaccacggggcaccctccgac
gagtcccgcagccgcgtcggcgaccccgccgaccatttcttcaccaaccttcagttcggc
aacgccgtcgctggcccagccccgggcaacgcgcagaccaacaaggctttaccgaggatg
agaggcagtagcgctggtggttcgggcgtcgccatgccgaagacgcggggcgcggcagaa
atgtacgacgtggcgcacagcttgcactactgcaagggctgccgccgcgtgaccgcgatt
acggtcgacccctcctccggcgacaccgtctgcaccgagtgctcgttggtcctgaacgag
cgctacgtcgacgagtccttcgagtggcgcaccttcctcaaccacggggcacccgcggac
gagtcccgcagacgcgtcggcgaccccatcgccggcccagccccgggcgacgcgcagacc
aacacggcgttaccgaggaagagaggcggtggcgctggtggttcctgcgtcgccaagccg
aagacgcggggcgcggcagcaacggcggccctggatagggcgctcgccgacgcgttccat
gccatggacggcatggccgagcggcttgggctcgcgacgaccgtcaaggaccgcgccaag
gacgtgctgaggaagctggaggtcgccaaggtgtttcgcaaggggggcaagtgccggaac
cgccaggcgctctacgcggcctgcctcctcatggcgtgccgcggcgagggcacgcagctg
acgttcaaggagctggcgtccgtgacgggggacagcgccacggcggggatcaaggacacc
ggcaggctcgtcatgctcatcaggaaccacctcggggatcaggaaggatcaggatcggcg
ctggagatgggcgccgtggtgcgggccggcgactacctgcaccgcttcggctcgctgctc
gggatggggcaagaggagctgcacgcggcgcagcaggcggcgcggaggctggagaaggac
ctggacgtgaggcgcaaccctggctccatcgcggcggccgtcatctacatggcggtggag
cgcgccaacgccgggaaatccatccgggacgtgtccacggccaccggcgtcggtgaggtg
accatcagagacgtgtacaacaaggacctcagcccacacgccgacctgctattcggttag
DBGET
integrated database retrieval system
