Brachypodium distachyon (stiff brome): 100844902
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Entry
100844902 CDS
T01717
Name
(RefSeq) structural maintenance of chromosomes protein 1 isoform X2
KO
K06636
structural maintenance of chromosome 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100844902
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100844902
Meiosis-specific proteins
Cohesin complex and associated proteins
100844902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
ATG14
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
100844902
NCBI-ProteinID:
XP_010234218
UniProt:
I1I069
LinkDB
All DBs
Position
3:11502681..11514338
Genome browser
AA seq
1227 aa
AA seq
DB search
MAAAPSDGHSRRSGGGRIHRLEVENFKSYKGTQTIGPFFDFTAIIGPNGAGKSNLMDAIS
FVLGVRSAHLRGAQLKDLIYALDDRDKEAKGRRASVRLVYNLPSTGAELHFSRTITGAGG
SEYRIDGRVVTWDDYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQIAGSD
ELRREYDETEDLKTRAEEKSALVYQEKRTIVMERKQKKAQKEEAEKHLRLQQDLKVLKTE
HLLWQLYTIENDMEKIEAELEEGRQSLQQVREENQSSDHELAAKKKEQSAFLKKMTLCEK
SMAKKKLDIDKKQPELLRLKEQISRLKSKMKSCNKEIDKKKDDSKKHLEEMKRLHSALVD
VTRAIEELNEQGQDKSVKLQLADDQVQEYHRIKEDAGMRTAKLRDEKEVLDKELNADVEA
KKNLEENMQQLRSRVDEISSQESELHTRLNKILNSIPKHEDELTRLREEHNKIAKERQSS
GAKYQTLKQRVDEIDTQLRELKADKHEGERDARFSETVRSLKRLFPGVHGRMTELCRPAQ
KKYNLAVTVAMGKFMDAVVVEDESTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRT
LGGSAQLIFDVIQFDRALEKAVLYAVGNTLVCDKLDEAKTLSWSGERYKVVTVDGILLTK
SGTMTGGVSGGMEARSNKWDDSRIESLKKKKNQLESEMSELGSPRELQRKELAVSEKITG
LEKKLHYSNVEQNNLKEKLHKLASEKRNIENEIDHLEPGKEELENRLAKNDREVRKREKK
INEIVDRIYKDFSMSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRD
MHAPIAKLKESHESLEKELKGLQERESGAKAEAEHILNQMEELKAEAEDWKLKSDECEKA
IDELKEQNASVAAALAKLDRQVKLMEGQLAQLRARRREIHEKCELEQLKLPTVSDPMDTG
SSSQELVLDYSQLREIYMQDMRLSERDKLEADFKQKIGTLMAEIERTAPNLKALDQYEAL
QRKEKEVTEKFEAARKEEREIAEKYNSVKQKRYELFMEAFDHISKGIDKIYKQLTKSHTH
PLGGTAYLNLENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPS
PFFILDEVDAALDNLNVAKVAGFIRSKSCEGAGEEQDGDGGCGFQSIVISLKDSFYDKAE
ALVGVYRDSEGSCSRTLTFDLTKYKEA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccctccgatggtcacagccgcaggagcggcggagggcggatccatcgg
ctggaggtggagaatttcaagtcgtataaaggaacgcagactatcggccccttcttcgac
ttcacggctatcatcggccctaacggcgccggcaagtccaacctcatggatgccatcagc
ttcgtgctcggcgttcgctccgcacacctccgtggcgcccagctcaaggacctcatctac
gccctcgacgaccgtgacaaggaggccaagggccgcagggcctccgtccgcctcgtctac
aacctccccagcaccggggccgagctccatttcagccgcaccatcactggtgctggcggc
agcgagtaccgaatcgacggccgggtcgtcacctgggacgactacaacgccaagctcaga
tcccttggtatccttgtcaaggctcggaacttcctcgtcttccagggtgatgtggagtcc
attgcctccaagaaccccaaggagctcaccgcacttctggagcagatcgctggctctgac
gagctcaggcgggagtatgacgagacggaggatctgaaaaccagggccgaagagaaatct
gcacttgtctatcaagagaaaaggaccatcgtcatggagaggaagcagaagaaggcgcaa
aaggaagaggcagagaagcatctacggttacagcaggacctgaaagtgttgaaaacagag
catctcctatggcaactctacaccattgaaaacgacatggagaaaatagaagctgagctt
gaggagggcaggcagtctcttcagcaagtgcgggaagagaatcagtcctctgaccacgag
cttgctgcaaaaaagaaagagcaaagtgcatttctcaagaaaatgaccttatgcgagaaa
agtatggccaagaaaaagcttgatattgacaagaagcaacctgagcttcttagattgaaa
gagcaaatatctcggctgaagtccaaaatgaaaagctgcaacaaagagattgacaaaaag
aaggatgatagcaagaaacatttggaagagatgaaaaggctgcatagtgctttggttgat
gtcacaagagctattgaggagttgaatgagcagggccaagataaaagcgtgaaactgcaa
ttagctgatgatcaagtccaggaatatcatagaattaaggaagatgcaggaatgaggaca
gcaaagctgagagacgagaaagaagtattagacaaagagctgaatgctgatgttgaagcc
aaaaaaaatttggaggagaatatgcagcagcttcgtagccgcgtggatgagatatcatca
caagagagtgaattgcacaccaggcttaataagattcttaactcaatccccaagcatgaa
gatgagctcacacgtttacgtgaggaacataacaaaattgcaaaggaacgccagtcttca
ggtgctaagtatcaaacattgaagcagagggttgatgagattgatacacaattacgagaa
ctcaaagctgacaagcatgaaggtgagcgggatgctcgattctcagaaactgttaggagt
cttaagcggctattccctggagtccatggtcgcatgactgaactttgtaggcccgcacag
aagaaatacaaccttgctgttactgttgccatggggaaattcatggacgcagtagtggtg
gaagatgaaagcacaggaaaggaatgcattaagtatttgaaggaacaacgtcttcctcct
cagacatttattcccttgcaatcagtccgggtgaagccaataattgagaagttgagaact
cttgggggatctgcacagttgatctttgatgtgattcaatttgatcgagctttggagaaa
gcagttttgtacgctgttgggaatacgcttgtctgtgataaacttgatgaagctaaaact
ttaagttggagcggtgaaaggtacaaggttgtcactgtcgatgggattcttctgacaaaa
tctggcacaatgactggtggagtaagtggtggaatggaagctagatcaaataaatgggat
gacagcagaatagaatctttgaagaagaagaaaaatcagctagaatctgaaatgtcagaa
cttggctcccccagggagttgcagagaaaggagcttgctgtatctgagaaaataactgga
ctcgagaaaaagttacattactctaatgtcgaacagaataacctcaaggagaagctacac
aaattggcatctgagaagcgtaatatcgagaatgaaattgatcatctggagccaggaaag
gaggagttggagaaccgtcttgctaaaaatgaccgggaagtcagaaagcgggagaaaaag
ataaatgagatcgtggacaggatttacaaagattttagcatgtcagttggggtgaaaaac
atccgtgaatatgaagaaaggcaactgaaagatgcccaagcactgcaggagaggaaactg
agcctaagtaatcaaatgtcaaaattgaaataccagctggaatatgagcaaaagagagat
atgcatgcaccaattgcaaagttaaaggagtcacatgagtccctagagaaggagctgaag
ggcttacaggagagagagtctggcgctaaggctgaagcagaacatattttgaatcagatg
gaagaactgaaagctgaggctgaagactggaaactgaagtcagacgaatgtgagaaggct
attgatgaactaaaggagcagaatgctagtgttgctgctgcattggcaaagctggatcgc
caagttaaactaatggaggggcaacttgctcaacttagagcacgccggcgggagattcat
gagaagtgtgaactggagcagctgaagcttcccaccgttagtgatccaatggataccgga
tcatcctcacaagaactggtccttgattacagccagctcagagaaatctacatgcaggac
atgcggttatccgaacgtgacaaacttgaggcagatttcaaacaaaaaataggtacatta
atggctgagattgagcgcactgctccaaaccttaaagcacttgaccaatatgaagcactg
caaaggaaggaaaaggaggttaccgaaaagtttgaggcagctaggaaagaagagcgagag
atagctgaaaagtataactccgtcaagcaaaaaaggtatgagctgttcatggaagccttt
gatcacatatctaaaggcatagacaaaatctataagcagttgacaaaaagtcacacacat
ccacttggtggaacagcatatttgaatctagaaaatgaagacgagccatttctgcatgga
atcaagtacacagctatgccacctacgaagcgctttagagatatggaacaattatctggt
ggggagaagactgttgcagctctggcattgctttttgccatccacagtttcaggccatca
ccattcttcatattggatgaagtggatgcagctctggataatctaaatgttgccaaggtt
gctgggtttatcagatcaaagtcatgtgaaggtgctggcgaagagcaagatggtgatgga
ggctgtgggtttcagagtattgtaatatcgctgaaggacagcttctacgacaaagcggaa
gcactggttggtgtttacagggactcagaaggaagttgctccagaaccctcaccttcgac
ctgacgaaatataaagaagcatga
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