Brachypodium distachyon (stiff brome): 100844943
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Entry
100844943 CDS
T01717
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100844943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100844943
03036 Chromosome and associated proteins [BR:
bdi03036
]
100844943
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100844943
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100844943
PBAF complex
100844943
GBAF(ncBAF) complex
100844943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SURF2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
100844943
NCBI-ProteinID:
XP_003579976
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Position
5:17208680..17218136
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AA seq
776 aa
AA seq
DB search
MSPAAAGAASSGEAPPSRPKRELYTIPASSSWFRWDDIHETERSALPEFFGGPGGNSYGT
ASRNPRIYREYRDYIINKYREDPARRLTFTEVRKALVGDATLLRKLFGFLDSSGLINFSA
TSPRPVAQQPGLDAVLEAPVGLQVTPRPQVSYSVEERFGGGTGENVFRLPPLSSYVDVFG
EWAPGKGPICAFCGVECKDGKVETLEDGFKVCSTCCKTNSDNEEANKCAGDKKESADNHA
SSAWTDAETLLLLEGVLKHGDDWDLITQHVRTKNKLECIARLIQLPFGEHMLGAINGKSD
SRFQTSQTTDGKTNHYIVKDTSSQSNEMVDGMQIDGEQDGADKLVEEQPSKRQRLSSSID
VTGSLMEQLALLTTATSLDVVAAAAAASIKALGSENPQAKNAFHLSEKEYQGKTFSSNHI
HESECNVGDQEGEMHGQTVPDKKLQKKYISTAYQVRAAVGTAVGVAAARAKMLVDQEERE
IELLLASIIETQLRKIQYKIKHFEELELIMDQEYNTIQQIKESLINEWLKVLEQAFQAGV
PIQRDEVLTKLFLNKATGHELPEREKDSYARSRACRIALIDHGVAHKKPPLSAFKPHPEH
KSKLICNITGDTINKSEEHIWKHVNGKRFLNKLEKLEEKMTSSETTKGEVEQSKEVAKKS
KSSKKKDKKKAAVVDTSLPREPQPEIDDSDDSEFWVPPVGSRWDDDDGKDRWESPPGKDD
VAEDEGASDEDGDDDMADEDDDVSNELASSSTKRLSVEAVGPSSFASRKKKPRKDE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggccgccggcgccgcctcctccggcgaagcgccgccgtcgcgtcctaag
cgcgagctctacaccatcccggcctcgtcaagttggtttcgctgggacgatatccacgag
acggagcgaagtgccctgccggagttcttcggcggccccggcgggaacagctatgggacg
gcctcgcggaatccccggatctaccgcgagtaccgcgactatatcatcaataagtaccgg
gaggaccctgcccgccgcctcaccttcaccgaggtccgcaaggcgcttgtcggcgacgcc
acgctcctccggaagctgttcggcttcctagactcctcaggcctcatcaacttctctgcc
acctccccccgccctgtggcacagcagcctgggttggacgccgttttagaggcgcctgtg
gggttgcaggtgactccacggccgcaggtgtcctactccgtggaggagaggtttggagga
gggactggggagaatgtgttccgcttgcctccgctgagctcgtatgtcgatgtgttcggg
gagtgggcgcctgggaaggggcctatatgtgcattctgcggagtggagtgcaaggatggg
aaggtggaaactttggaggatggttttaaagtatgttcaacgtgttgcaaaaccaatagt
gataatgaggaagcgaataaatgcgctggtgataagaaagagagcgctgacaaccatgct
tctagtgcatggacagatgcagagacactactccttttagaaggtgtcctaaaacatgga
gatgactgggatctcattacccagcatgtccgcacaaagaataaattagaatgcattgca
aggcttattcagttgccttttggtgaacatatgttgggtgccataaatggtaaatctgat
agtaggttccagacgagccaaactactgatggcaaaacgaaccactatattgtgaaggac
acttcaagccagtcaaacgaaatggttgacggcatgcagattgatggagagcaagatggt
gctgataaacttgttgaagaacaaccttcaaagcgccaacgtttatcttcctcaatagat
gtgaccggttcattaatggagcagttagcactgctgactactgcgacgagcctggatgtt
gttgctgcagccgctgctgcgtcaattaaagcattaggtagtgaaaaccctcaagcaaag
aatgcttttcatcttagcgagaaagaataccaaggcaaaacattctcttctaaccatatc
catgagagtgaatgcaatgttggcgatcaggaaggggaaatgcatggacagactgttcct
gataagaagctgcaaaagaagtatatttctactgcatatcaagtgagggcagctgttgga
acagctgttggggtagctgccgcccgcgctaagatgcttgtggatcaggaagagcgggag
attgagcttctgttggcatccataattgagactcagctaagaaagatccagtacaagatc
aaacactttgaggagctagagttgatcatggatcaggagtacaacacgatacaacagata
aaggaatccctcatcaatgaatggctaaaggtcctcgagcaagcatttcaggctggagta
ccgattcagagggatgaagtgcttacaaagctgttcctgaacaaagcgacggggcacgag
ctgccggagcgggagaaggactcgtacgcgcggtcccgcgcctgccgcatcgcgctcatc
gaccacggcgtcgcgcacaagaagccgccgctcagcgccttcaagccccaccccgagcac
aagtcgaagctcatatgcaacattactggggacaccataaacaagtcggaggagcacatc
tggaagcatgtaaatgggaagagatttctgaataaactagaaaaactggaagaaaagatg
acatcaagtgagacaaccaaaggagaagttgaacaatcaaaagaagtcgcaaagaaatcc
aagtcgagcaagaagaaggacaagaagaaagctgcagttgttgacacttctttgccacga
gaacctcaacctgagattgatgattcagatgactcggagttttgggtgcctcctgtagga
agtcgttgggacgatgatgatgggaaagaccgatgggagtcccctccagggaaggatgat
gtggcagaggatgaaggtgcatctgatgaagacggcgacgatgatatggctgacgaggac
gatgatgtgtcaaacgaacttgcttcaagcagtacaaagcgattgtcagtagaagcagtt
gggccaagtagcttcgcttcaaggaagaaaaaaccccgaaaggatgagtga
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