Brachypodium distachyon (stiff brome): 100845015
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Entry
100845015 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100845015 isoform X2
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100845015
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
100845015
Ribosome biogenesis [BR:
bdi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
100845015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
Ubie_methyltran
GCD14
Motif
Other DBs
NCBI-GeneID:
100845015
NCBI-ProteinID:
XP_010238266
UniProt:
I1IR18
LinkDB
All DBs
Position
4
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AA seq
566 aa
AA seq
DB search
MEGKVLALPHYRARVGSPILLSADAGSAARRGSGRSRVSRYDAEAPPGRAGRGRVWKPDN
PDSSPRRAGISGVPKLNPNVSTKRAGMSKVPIINFEVSHHRAVAAVRLLRAEKGKAFVDL
LNEKGNDSGENEMGYVERTLGFSTRHLDDRDIRLVTVIVAGTVRWKRYLDYLIMSLCSEE
KVFSDMEPLLLQILRIGFFEILKLNVPAYAVVDENVRLAKVALRPGAGNMVNAILRKLLL
LKETDSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRVLGKDEALKLMNWNNSDPYFS
LRVNTASGYIRADLVERLEDLQVHYEISIMDEFVRIREGMQAVLQAGLLKDGMCAVQDES
AGLVVSVVDPQPGETIIDCCAAPGGKTLFMASRLSGQGKIWALDINKGRLRILMEAAKSH
NLDHMITDIHGDLRLHAKESTVKYDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELMCL
QDELLDSASSLVKPGGVLIYSTCSIDPEENENRVTSFVQRHPEFIPQGVHGYVPAQFVTD
EGFYSSNPTKHSLDGAFAARLVRSMH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaagtgctcgccctcccgcactaccgagcgcgggttggctcgcctatcctt
ctctcagcggatgccggctccgccgcgcgcaggggctccgggaggagtagggtctcgagg
tatgatgcggaagctcctccaggcagagcggggaggggtagggtttggaagcctgataat
ccagattcttcacctcgccgagcagggattagtggggttccaaagcttaatccgaacgtt
tctactaaaagagcagggatgagtaaggttccgattattaattttgaggtttctcatcac
agagcagttgcagcggtgaggttgctaagagctgagaaaggcaaagcatttgtcgacctt
ttgaatgagaaaggaaatgattctggagagaatgagatgggttatgtagaaaggacacta
gggttcagtacacggcatttggatgacagggatataagattggttactgtcatagtagct
ggaactgtacgttggaaacgctaccttgattatcttatcatgtcactctgtagtgaggag
aaggtgttcagtgatatggaaccgctgctgctgcagatattgcgaattggcttcttcgaa
attctcaaacttaatgtaccagcttatgccgtcgttgatgagaatgtaaggcttgcgaaa
gtagctttaaggcctggtgctgggaatatggtgaatgctattctgcgtaagcttctatta
ctgaaggagacagactctcttcctcttccaaagatagaaggcgatgaccgtgcccaagct
cgtgccctttccataatttattctcatcctgtttggatggtgagaagatggattcgtgtt
cttgggaaagatgaagctctaaaattgatgaattggaataacagcgatccttacttcagc
ctaagggtgaacacagcgagtggctatataagggcggatcttgttgaacgattggaagat
ttgcaggttcattacgagatatcaattatggatgagtttgtccgtattcgggagggcatg
caggcagtcttacaagccggattactgaaagatggcatgtgtgctgtgcaggatgagagt
gcaggtcttgttgtgtctgtggtcgatccacaacctggggaaacaatcattgattgttgt
gctgcacctggtggaaagacattattcatggcatctcggttgtcagggcaagggaagata
tgggctcttgacataaacaaaggccgcttgagaattctcatggaggcagcaaagtcacac
aatcttgatcatatgatcactgatatccatggtgatcttcgattacatgctaaggaaagc
actgtcaaatatgacaaggtattgttggatgctccttgttctgggctgggagtcctttcc
aagagggcagacttgcgctggaatcggcaatttgaagatttggaggagttgatgtgtttg
caagatgagctccttgattcagcatcatcgttggtaaaacctggtggtgtactaatctac
agtacatgttccattgatcctgaagaaaatgagaaccgagttacttcttttgttcagagg
catccggagtttatcccacagggtgtacatggatatgttcctgcacaattcgtgacagat
gaaggtttctattcctcaaatccaactaagcactctctggatggggcatttgctgctcgt
cttgttcggtcaatgcactag
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