Brachypodium distachyon (stiff brome): 100845035
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Entry
100845035 CDS
T01717
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100845035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100845035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100845035
Membrane trafficking [BR:
bdi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100845035
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100845035
Exosomal proteins of other body fluids (saliva and urine)
100845035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
NodS
DUF334
RasGAP_C
Piezo_RRas_bdg
T2SSF
Motif
Other DBs
NCBI-GeneID:
100845035
NCBI-ProteinID:
XP_003560038
UniProt:
I1GNK5
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All DBs
Position
1:complement(6776379..6777732)
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AA seq
317 aa
AA seq
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MNDLMTKSFMSYVDLKKAAMKDLEAGGGDETELTEAGCAAGGVTDERLKGFFKEAEVVKE
EMAAIRDALARLHAINEEGKSLHQPEALRAMRGRVNADIVAVLRRARDIRVRLEAMDRAN
AAQRRLSAGCSEGTPLDRTRTSVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTL
TGEVPEDEVIERIISEGRGEEIMGAAVAEHGKGAVLAALHEIQDRHDAAREVERSLLELH
QVFLDMAVVVESQGEQIDDIERHVVNARDYVHTGNKELGKAREHQRSSRKCLCIGLILLL
LLILIVVVPVVTSFKTS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcatgaccaagtccttcatgagctacgtcgacctcaagaaggcggcgatg
aaggacctggaggcgggtggcggcgacgagaccgagctcacggaggcgggctgcgccgcc
ggcggcgtcaccgacgagcggctcaaggggttcttcaaggaggcggaggtggttaaggag
gagatggccgccatccgcgacgcgctcgcccgcctccacgccatcaacgaggagggcaag
tcgctccaccagcccgaagcactgcgcgcgatgcgggggcgcgtcaacgccgacatcgtc
gccgtgctccgccgcgcccgcgacatccgcgtcaggctcgaggccatggaccgcgccaac
gccgcccagcgcaggctctccgccggctgcagcgagggcaccccgctggaccgcacccgc
acctccgtcaccgccggcctccggaagaagctcaaggacctcatgctcgacttccaggcg
ctgcggcagcgcatgatgtccgagtacaaggagaccgtcgagcgccgctactacacgctc
accggcgaggtcccggaggacgaggtgatcgagcgcatcatctccgagggccgcggcgag
gagatcatgggcgcggccgtcgcggagcacggcaagggcgcggtgctcgccgccctgcac
gagatccaggaccgccatgacgcggcccgggaggtggagcgcagcctcctggagctccac
caggtgttcctcgacatggccgtcgtggtggagtcgcagggggagcagatcgacgacatc
gagcgccatgtcgtcaacgccagggactacgtccacaccggcaacaaggagctcggcaag
gcccgcgagcaccagcgcagcagccgcaagtgcctctgcatcggcctcatcctactgctg
cttctcatcctgatcgtcgtcgtccccgtcgtcaccagcttcaagacatcgtag
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