Brachypodium distachyon (stiff brome): 100845074
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Entry
100845074 CDS
T01717
Name
(RefSeq) protein argonaute 4A isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100845074
03036 Chromosome and associated proteins [BR:
bdi03036
]
100845074
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100845074
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100845074
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100845074
microRNA pathway
RISC loading complex
100845074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100845074
NCBI-ProteinID:
XP_010230772
UniProt:
I1HEF7
LinkDB
All DBs
Position
2:complement(8620523..8628737)
Genome browser
AA seq
924 aa
AA seq
DB search
MESHDGVADDLPPPPPLPPSIEPLKPEEADDLPPPPPLPPNVEPIKVEDAKKPRRTLISR
PGFGKNGKPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQTY
ASELAHKDFAYDGEKSLFTIGALPQVNNEFVVVLEDVSSGKTAANGSPGNDNSPGSDRKR
VRRPYQTKTFKVELNFASRIPMSSIAMALQGQESEHTQEAIRVIDIILRQHAAKQGCLLV
RQSFFHNNPSQFVDLGGGVMGCRGFHSSFRATKSGLSLNIDVSTTMIVKPGAVVDFLIAN
QKVDHPNKIDWAKAKRALKNLRIKTSPANTEFKIVGLSERNCYEQMFSLKQRNNGNGDSE
AIEISVYDYFVKNRGIELRYSGDFPCINVGKPKRPTYFPIELCSLVPLQRYTKSLSTLQR
SSLVEKSRQKPQERMSVLSDVLKRSSYDTDPMLKACGISIAQGFTQVPGRVLQPPKLKAG
NGEDIFTRNGRWNFNNKRLVRASCVERWAVVNFSARCNCNDLVRDLIKCGGMKGIKVDQP
FDVFEENSSMRRAPAPKRVEAMFETVKTKLPGAPKFLLCILAERKNSDVYGPWKRKCLAE
FGIVTQCVAPTRVNDQYLTNVLLKINAKLGGMNSLLQIELSPAIPLVSKVPTMILGMDVS
HGSPGQADTPSIAAVVSSREWPLVSKYRASVRSQSPKSEMIDSLFKPQGTEDDGLIRECL
IDFYTSSGKRKPDQIIIFRDGVSESQFTQVLNKELDQINEACKFLDESWSPKFTLIVAQK
NHHTKFFIPGSPDNVPPGTVVDNVVCHPKNYDFYMCAHAGMIGTTRPTHYHILHDDIHFT
ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVSQFVKFDEMSETSSSQGGGGHT
SAGSTPVQELPRLHEKVRSSMFFC
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcatgatggcgtggctgatgacttgccaccaccaccacctctgccgccaagc
atagagcctcttaaacctgaggaagctgatgacttgccacctccaccaccactaccacca
aacgttgagcctattaaagttgaggatgcaaagaagcctaggaggacgctgatctcacgt
cctgggtttggcaagaatgggaagccgatacagcttgtgacaaaccattttaaagtttcc
ttgaaaacaactgatgagttctttcaccattattatgtaaatctgaagtatgaggatgac
aggccagttgatggaaaaggagtgggtagaaaagtcattgataagctacaacaaacttat
gcatctgagcttgcgcataaagattttgcttatgatggggaaaagagtctttttaccata
ggtgctctaccacaagttaacaatgagttcgttgtggtgcttgaagatgtttctagtgga
aagactgctgcaaatggcagccctggaaatgacaactctccaggaagtgataggaaaaga
gtcagaaggccatatcagactaaaacttttaaagtggagctcaactttgcttctaggatt
ccaatgagttctatcgcgatggctctgcaaggtcaggaatcagagcacacgcaggaagca
attcgggttattgatatcatattgagacaacacgccgccaagcagggttgccttttagtc
cgccaatcctttttccataacaatccatcacaatttgtggatctgggaggcggtgtaatg
ggctgcaggggatttcactcaagcttccgagccacaaagagcgggctttctcttaatatt
gatgtatctacaacaatgattgtgaaacctggcgctgtcgttgattttctaattgccaac
cagaaggtagatcaccccaataaaattgattgggcaaaggctaagcgtgcactgaagaat
ctaaggataaaaacaagtccagcaaacacagaatttaagattgttggactgagtgaaagg
aactgttatgaacaaatgttttcactgaagcaaaggaataatgggaatggtgactctgaa
gccatagaaatatctgtttatgattactttgtgaagaatcggggcatagagctaagatat
tctggtgatttcccctgtatcaatgtggggaaaccaaagcgcccaacatattttcctatt
gagctctgctcgcttgtgcctttgcaaagatataccaagtctttaagtactctccaaagg
tcctctcttgtcgagaagtcgaggcagaagcctcaagaaaggatgtctgttttgtctgat
gtacttaaacgcagcagctatgacacagatcccatgctaaaggcatgtggaatttcgata
gctcaaggttttacgcaagtgcctggtagggtactgcagccccccaagctcaaagctgga
aatggtgaagatattttcacaaggaatggccgatggaatttcaataacaagaggcttgtt
agagctagctgtgtggaaagatgggcagtggttaacttttcggcacggtgtaactgcaat
gatcttgttcgagacctcatcaagtgtggaggcatgaagggcattaaagtagatcagcct
tttgacgtgtttgaagagaattcttcaatgagaagagcacctgctccaaaaagggtggag
gctatgtttgaaacagtgaagacaaagcttcctggagcacctaagtttttgttgtgtatc
cttgctgagaggaagaattcagatgtttatgggccttggaagcgaaaatgtctagctgaa
tttgggattgtcacacaatgtgtggccccaactagggtcaatgaccaatatctgacaaat
gtcctgctaaaaataaatgcaaagcttggtgggatgaattctttgctgcaaattgaactg
tcccctgcaatccctcttgtatcaaaggtcccaactatgattttgggcatggatgtgtcc
catgggtcccctggacaggctgatacaccatctattgctgcagtcgttagttctcgtgaa
tggcctcttgtctcaaagtacagggcctcagtgcgttctcagtcaccaaaatcagaaatg
attgattcactgtttaagccacaaggaactgaagacgatggccttattagggagtgccta
atagacttctataccagttctggaaaaagaaaacctgatcagattataatcttcagggat
ggtgttagtgagagccaatttactcaggtgctaaacaaggagttagatcaaataaatgag
gcatgcaaattcttggatgaaagttggtcccccaaattcacactaattgttgcgcagaaa
aaccaccacacaaagtttttcatccctggatcaccggataatgtccctcccggcactgtt
gttgataacgtagtttgccatccaaagaactatgatttctacatgtgcgcacatgcagga
atgataggaacaacaaggccaacacattaccatatcctgcatgatgatatacactttacc
gcagatgatctgcaggatctcgtgcactcgctctcttatgtgtaccaaagaagcacaacg
gccatatcagtagtctctccaatctgctatgcccatcttgctgctgcccaagtgtcacag
ttcgtcaagtttgatgagatgtctgagacgtcttcaagtcagggaggcggaggccacacc
tctgcaggcagcaccccagtgcaagagctgcctcgcctgcacgagaaagtcaggagctcc
atgttcttctgttga
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