Brachypodium distachyon (stiff brome): 100845110
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Entry
100845110 CDS
T01717
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100845110
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100845110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
100845110
NCBI-ProteinID:
XP_003575549
UniProt:
I1IHN7
LinkDB
All DBs
Position
4:complement(4241495..4246966)
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AA seq
666 aa
AA seq
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MSEDAQRYGGGGGSGGGGSSGGIGALSLDLLCQVLDRVQERRDRKACRLVSRAFARAEAA
HRRALRVLRREPLPRLLRAFPALELLDLSACASLDDASLAAAVAGADLGAVRQVCLARAS
GVGWRGLDALVAACPRLEAVDLSHCVGAGDREAAALAAAAGLRELNLEKCLGVTDMGLAK
VAVGCPKLEKLSFKWCREISDIGVDLLVKKCRELRNLDISYLEVSNESLRSISTLEKLEE
LSMVGCLCIDDKGLELLSRGSNSLQSVDVSRCDHVTSEGLASLIDGHSFLQKLNAADSLH
EIGQNFLSKLATLKETLTMLRLDGFEVSSSLLLAIAEGCNNLVEVGLSKCNGVTDEGISS
LVARCGYLRKIDLTCCNLLTDNALVSIADNCKMLECLLLESCSSLSEKGLERIATCCPNL
SEIDLTDCGVNDAALQHLAKCSELLILKLGLCSSISDKGLGFISSKCVKLTEVDLYRCNS
ITDDGLATLAKGCKKIKMLNLCYCNKITDGGLSHLGSLEELTNLELRCLVRITGIGISSV
AIGCKSLVEIDLKRCYSVDDSGLWALARYALNLRQLTISYCQVTGLGLCHLLSSLRCLQD
VKMVHLSWVSIEGFEMALRAACGRLKKLKMLSSLKSVLSPELLQLLQACGCRIRWVNKPL
VYKDGI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatgcgcagaggtacggcggcggcggcggcagcggcgggggcgggagcagc
ggcggcatcggggcgctgtccctggatctgctctgccaggtgctcgaccgcgtgcaggag
cggcgggaccgcaaggcgtgccgcctcgtcagccgcgccttcgcgcgcgccgaggccgcg
caccgccgcgcgctgcgggtgctccggcgggagccgctccctcgcctgctccgcgcgttc
ccggcgctcgagctgctcgacctctccgcctgcgcctcgctcgacgacgcgtctctcgcg
gccgccgtggccggcgccgacctcggcgccgtccgccaggtctgcctcgcgcgggccagc
ggggtcgggtggcgcggcctggacgccctcgtcgccgcctgccccaggctggaggcagtc
gacctgtcgcactgcgtcggcgctggggacagggaggccgcggctctggcggcggccgct
gggctgagggagctgaatctggagaagtgcctcggcgtcactgacatgggcctcgccaag
gtagctgtgggctgccccaagcttgagaagctgagcttcaagtggtgccgtgagatttcc
gacatcggtgttgatctgctcgtcaagaagtgccgcgagctccgcaaccttgatatctcc
tacctagaggtgagcaatgagtctcttagatcaatatcgactcttgaaaagctagaggag
ttgtcgatggttggttgcttatgtatagatgacaaaggcctggaattgctaagcagagga
agtaattcactgcagagtgttgatgtgtcaagatgtgatcacgtgacttccgaaggctta
gcttcactcatagatggtcacagttttctccagaagctaaatgctgctgatagtttgcat
gagattgggcagaattttctatccaagctagcaacactgaaggaaacattgacaatgttg
agacttgacggctttgaagtctcatcctctcttcttttagcgattgctgaaggctgtaac
aacttggttgaggttggacttagcaaatgcaatggtgttacagatgaaggcatctcttcg
cttgtagctcggtgtggctacctaaggaaaattgatctcacatgctgtaatctactcact
gacaatgcccttgtttcaatagctgacaactgtaagatgcttgaatgcctcctgttggag
tcctgctcttcattaagtgagaaaggactagagagaatcgctacctgctgccccaatctt
agtgagatagatcttactgactgtggagtgaatgatgcagcgctgcagcatttggctaag
tgctctgaactgctgatattgaagttaggcttgtgctcaagtatttctgacaaaggcctt
ggttttattagttcgaagtgtgtaaaactcacagaagttgacctctatcgctgcaactct
attaccgacgatgggttagcaactttagcaaagggctgcaaaaagattaagatgctgaac
ctgtgctactgcaacaagattactgatggtggtttgagccacctgggctctctggaggag
cttacaaaccttgagctgaggtgcctggtccgcattacaggtattggaatctcgtcagtt
gccattggttgcaagagcctggtagaaattgacttgaagcgttgctattctgttgatgat
tctggcttgtgggctctcgcacgatatgccctaaaccttagacagcttaccatatcatac
tgccaagttactggcttgggattgtgccacctgctgagctccctgaggtgcctccaggac
gtgaagatggtgcacctctcatgggtctccatagaagggtttgagatggcactgagagct
gcttgcggcaggctgaagaagctgaagatgcttagcagtctgaagtctgtgctgtcccct
gagctgctccagctgctgcaggcctgtggctgccgcatcagatgggtcaacaagcctctc
gtctacaaggatggcatctga
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