Brachypodium distachyon (stiff brome): 100845167
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Entry
100845167 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100845167
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100845167
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100845167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_10
Zn_ribbon_6
zf-rbx1
Prok-RING_4
RING_XB3-XBAT31
zf-RING_4
zf-Nse
Sina_RING
TerY_C
zf-RING_6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
100845167
NCBI-ProteinID:
XP_003564936
UniProt:
I1HUL9
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All DBs
Position
2:56451168..56454809
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AA seq
254 aa
AA seq
DB search
MSSLGFARIIPKRRRTKQVPSELVNRQLLDLNLLPAAEGTGNGSSPSTNEHVSHSRASGT
VVAGTSQLLVPPGAAESNIRMNSFPIDVEVIDDDVVIYASRSSLPRARQQSTRAVPVTVI
IDDDSETTAGPAGEALDEHVNTLLSLGTNPRHHHSGASVDNLVINIADTPETNRVLPKVM
QAVPEPVKEVPKEPKFSCPVCMNELVDPSSTICGHIFCQKCIKLSIQTQKKCPTCRKKLT
VNNYHRVYLPTTDH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccttggatttgcaaggattattcccaagaggcggcggactaaacaggttccg
tccgagcttgtgaaccgccagcttctggacctgaacttgcttccagctgctgaaggaact
ggtaatgggagttcaccttccaccaatgagcatgtctcacacagccgggcctctggtacg
gtagtcgctgggacttcacagctcttggtgccacctggtgctgcagagtcaaacattcgc
atgaatagttttcccatcgacgtagaagtgatcgatgatgatgttgtgatttatgcttca
agaagctcgctccctcgagcaaggcaacagtcgaccagggcggtacctgtcactgtgata
atagatgatgattcagaaactactgcgggaccagcaggggaagctcttgatgagcatgtg
aacacactactttctctcgggacgaacccaaggcaccatcactcgggagcatccgttgac
aaccttgtaataaacatagcggacacaccagaaaccaaccgtgtcttgcccaaggtgatg
caagctgtccctgaacctgtgaaggaggttccaaaggaaccaaagttcagctgccctgtc
tgcatgaacgagctggtcgacccgtcatcgaccatctgtggccacatcttctgccagaag
tgcatcaagctctccatccagactcagaagaagtgccccacctgccggaagaagctgact
gtcaacaactatcaccgtgtctacctcccaacgacagatcattaa
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