Brachypodium distachyon (stiff brome): 100845331
Help
Entry
100845331 CDS
T01717
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100845331
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
General mRNP proteins
100845331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
100845331
NCBI-ProteinID:
XP_003558785
UniProt:
I1H9L7
LinkDB
All DBs
Position
1:72109635..72117636
Genome browser
AA seq
551 aa
AA seq
DB search
MDFDEYEYLEKTVEAAAATGNGSAAPRSEGKERSSRRRSSAGDEDRDDGERRSKRSRSEN
RDRDRDRERERDRESSRHRSSRERRDRDRDRDEKEKEREREREKEKERERDKEKERRSRD
RDREREKEKERERRSRSRSERRRDDDERERHRERDYRDRDVRRRKEDGAEPEADPERDQR
TVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL
SGQLLLGQPVMVKPSEAEKNLVQSSATSSVAASGGARKLYVGNLHANITEDQLRQVFEPF
GLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQAGVQ
VSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTSLTSGMGAAGLNTSVTLPAVSV
LGAPPAAPALQPTLTGLGLIPGASVPVISQPIATAPPSECLLLKNMFDPAVETDPDFDLD
IKDDVREECSKFGQIRHIFVDKNTAGFVYLRFDSITAAMGAQKALQGRWFAGKMITATFM
SPQQYEAKFPS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacttggagaagacggtggaggccgctgcggctacgggt
aacggcagcgcggctccccgatccgaggggaaggaacgcagctcccgccgccggagcagc
gccggcgacgaggaccgcgacgacggcgagcgtaggtccaagcgctctcgctccgagaac
cgcgaccgcgacagggaccgggagcgggaacgggaccgcgagagctcgcgccaccgcagc
agccgggagcgccgagaccgtgaccgcgaccgcgacgagaaggagaaggagagggagagg
gagagggagaaggagaaggagagagagagggataaggagaaggagaggaggagccgcgat
cgtgaccgcgagcgtgagaaggagaaggagagagagcggaggagccggagccgctcagag
cggcgtcgcgatgacgatgaacgtgagcgccaccgagagcgcgactaccgtgaccgcgat
gtcagacgtaggaaagaagatggtgctgaacccgaggcagatccagaaagagatcaaaga
actgtatttgctttccagctatcactgaaggcggatgaaagggatgtttatgagtttttt
tcaagagctgggaaggtcagggatgtccgtcttatcatggatcgaaactcacgacgttct
aaaggagttgggtacattgagttctatgatgttatgtctgttccaatggcgattgctctt
tctggtcagctgcttcttggtcaaccggtgatggttaagccatcagaggctgaaaagaat
ttagttcagtcaagtgcgacttcaagtgtagcagcttcaggtggggcaaggaagttgtat
gttggaaatcttcacgccaatattacagaggatcagttgagacaggtcttcgaaccattt
ggacttgttgagcttgtccagctgcctgtagatccacttactgggttatgtaaaggtttt
ggttttgttcagtttgcgcgtcttgaagatgcaaaagctgctcagagtttaaatgggcaa
cttgatattgctggaagagtaatcaaggtttcagctgtgacggaccaagcgggagtgcaa
gtaagtggggcaactacaggagatttggacgatgatgaaggcggaggattggcacttaat
gctagctcaagagcacttcttatgcagaaattggaccgcagtggcgttacaaccagcttg
acttctgggatgggtgctgctggtttgaacacttctgtgacattaccagctgtatcagtt
cttggtgctcctcctgctgctcctgcactacagcctacgctaactggtcttggtctaatt
ccaggggcatctgttccggttattagccaacccattgcgacggctccacccagtgaatgc
ctattgctcaagaacatgtttgatccagctgtcgagacggatcctgattttgatttggat
attaaagatgatgttcgtgaagaatgttctaagtttggtcaaataagacacatctttgtg
gacaaaaatactgccggcttcgtctacctgcgatttgacagcattactgcggcgatgggt
gcacagaaagcacttcaagggagatggtttgcgggaaagatgattactgcaacctttatg
tctcctcagcagtacgaagcaaagttcccgagttaa
DBGET
integrated database retrieval system
