Brachypodium distachyon (stiff brome): 100845387
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Entry
100845387 CDS
T01717
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100845387
Enzymes [BR:
bdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
100845387
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100845387
Prokaryotic type
100845387
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
100845387
NCBI-ProteinID:
XP_003568149
UniProt:
A0A0Q3G2E4
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Position
2:complement(17866204..17872242)
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AA seq
693 aa
AA seq
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MARSSSVTEPEVGITCFTSSLPGFRGVLKHRYSDFIVHEVARDGSVVRLTSFDLPDECVD
VKEEEKAAPPADADHSQALESFHALSTDADCDALKGLLERVSAGGDSGFSPVILSPDADK
AHRSEVHNFFKKNFKFLVTDTVEHSDGVKKCIRVRVGSEAGGGRGSRGRGGGGRGKKRKN
MNGSDWRDDTPFDRRGSTNWPPHIGKFLRFHLCKENKDTQDALGVIGKMLGLQPRAFGFS
GTKDKRAVTTQQVTVFKVPANKLAALNKRLFGIKVGNFCYVKEGLGLGQLMGNRFTITLR
GVVAESEGVIKAAVDSLGKNGFINYYGLQRFGSSSVPTHLVGSALLRGEWKTAVKLILDP
REGERDDIKKVREHYKEHGDIDMALRNFPRHLVAEKAILQCLRKCPENYLQALKGIPRTL
RMMYVHSYQSYLWNHAASMRVQKYGISQVIEGDLIYSKESHPGEATSVGTSETDDDHANS
SEIDICSETLPEENIQSVKIVDSEDLLKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMA
KKDGISLTGSAHGVKEFSITNMKGSYRRVFQRPIDFEWELMKYTDESASLAETDMDILSK
VKLTEAKANEPGSSGVSNSKPADCKLESPSENSMPTSETSLGENKSNGSSDISPSKLAVK
LAFTLPASTYATMAIRELLKNPTSVAYQKTLDC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcgagctccgtcaccgagcccgaggtcggcatcacctgcttcacctcctcc
ctcccgggtttccgcggcgtcctcaagcaccgctactccgacttcatcgtccacgaggtc
gcccgcgacggctccgtcgtccgcctcacctccttcgacctccccgacgagtgcgtggat
gtgaaggaggaggagaaggcggcgccgcctgccgacgccgaccactcgcaggctctcgag
tcgttccacgcgctcagtactgacgcggactgcgatgcgttgaaggggcttctcgagagg
gtttcggccgggggtgacagcggtttctcgccggttattctctcgcctgacgccgacaag
gctcatcgatcggaggtgcataacttcttcaagaaaaacttcaagtttttggtcaccgat
acggtagaacacagcgatggggttaagaaatgcattagggtgcgcgtgggatcagaagca
gggggagggcggggcagtcgtgggaggggcggtggtgggagaggaaagaagaggaaaaac
atgaatggttctgattggagagatgacacgccatttgataggagagggtcaactaattgg
ccacctcatattgggaaattcctgaggtttcacctttgcaaagagaacaaggacacccaa
gatgcattaggagtaatagggaaaatgttaggactccagccacgtgcatttgggttttca
gggacaaaggataaacgtgctgttacgacgcaacaggtgactgttttcaaggtgcctgca
aataaattagctgcacttaacaagcgactgtttgggattaaagttggaaacttctgttat
gtgaaggagggacttggtcttggccaactcatgggaaatcggtttacaattaccctgaga
ggcgttgttgcagaatcagaaggcgtaataaaggctgctgtggatagcttagggaagaat
ggatttatcaactactacggtctgcagcgctttggaagcagttcagtaccaacccacctt
gttggatctgctttgcttagaggagaatggaaaactgctgtaaagttgattcttgatcca
agggaaggagagcgtgatgacataaagaaggtgcgtgaacattacaaggaacacggtgat
attgatatggcgcttaggaacttccctcgccatcttgtagctgagaaggctatacttcag
tgtttgagaaaatgccctgagaactacctacaagcattaaagggtataccaagaacgtta
agaatgatgtatgtacatagttaccaaagttacctttggaaccatgctgccagcatgaga
gttcaaaaatatggcatttcacaggtcatagaaggtgacttaatttatagcaaagaaagc
catcctggagaagcaacttcagtgggtacttcagaaactgatgatgaccatgcaaattca
tctgaaattgatatatgttctgaaacactcccagaagaaaatatccagtctgtgaagata
gttgattctgaagatttattgaaagggatctactcgtttgaagatgttgttcttcctttg
cctggttcacaagcattgttccctgggaatgaagttgctgaaatttaccatgaaatggct
aaaaaggatggaattagcttgacaggaagtgctcatggtgtcaaggagttctcaattaca
aacatgaaagggagttaccgccgggtgttccagaggcctattgattttgagtgggaactc
atgaaatacacggatgaaagtgcatctttagcagaaactgatatggatattctgtccaaa
gtcaagcttacagaagcaaaagcaaacgagcctggatctagtggagtttccaactccaaa
ccagctgattgcaagttggaaagtccatcggagaactcgatgccaactagtgaaactagc
ttaggagaaaacaagtctaatggcagctcagatatatcgccaagcaaactggccgtgaaa
ttagcgtttactttacctgcatcaacctatgctacaatggcaatcagggagttgctgaag
aatccaacgtcggttgcgtaccagaaaacacttgattgctaa
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