Brachypodium distachyon (stiff brome): 100845473
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Entry
100845473 CDS
T01717
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X2
KO
K08734
DNA mismatch repair protein MLH1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03430
Mismatch repair
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100845473
03460 Fanconi anemia pathway
100845473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100845473
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100845473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100845473
NCBI-ProteinID:
XP_003565112
UniProt:
I1HVE0
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Position
2:58284199..58291044
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AA seq
725 aa
AA seq
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MDVDDSAPRGGGEPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSIDAGASTVSVAV
KDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVG
HVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQVMVENLFYNMAARRKTLQNSND
DYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSASTSSRLDAIRNVYGVSVVRDLMEI
EVSDENAVDGIFTMDGFISNANYVAKKTTMILFINDRLVDCTSLKRAIEFVYSAILPQAS
KPFIYMSINLPREHVDVNIHPTKKEVSLLNQEHIIETIKDAIEEKLMNSNTTRIFQTQTV
NSSALAQANTQKEKGTDVSTATGAKSQKIPVSQMVRTDPLDPSGRLHTYWHGQSSNLEKK
SDLVSVRNVVRSRRNPKDAGDLSSRHELLTEIDSNLHPGLLDIVKNCTYVGVADEVFALI
QHNTRLYLVNVINVSKELMYQQALCRFGNFNAIQLSEPAPLRELLTMALKDDESMRDEND
KEKLEIAEVNTEILKENAEMINEYFSIHIDQGGNLTRLPVVLDQYTPDMDRLPEFILTLG
NDVTWDVEKECFRTAAAAIGNFYALHPPILPNPSGNGIQLYKKNKDQMASGEHADNDLTS
TEEDDVDQELLAEAEATWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYK
IFERC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacgactcggcgccgcgcggcggcggggaaccgccccgcatccggcggctg
gaggagtcggtggtgaaccgcatcgcggcgggggaggtgatccagcggccgtcgtcggcg
gtgaaggagctcgtcgagaacagcatcgacgccggcgcctccaccgtctccgtcgccgtc
aaggacggcggcctcaagctcatccaggtctccgacgacggccacggcatccggtttgag
gatttgccaatattgtgtgagaggcatactacctcaaagttgtctgcatatgaggatcta
cagacaataaaatccatggggttcagaggggaggctttggcaagtatgacttatgttggc
catgttactgtgacaacaataacagaaggccaactgcatggctacagagtgtcttatagg
gatggagtaatggagaatgacccgaagccctgcgctgcagttaaaggaactcaggtcatg
gttgaaaatttattttacaatatggcagctcgtaggaaaacattgcagaactccaatgat
gactaccccaagatagtggatttcatcagtcggtttgcagtccatcacatcaacgtgaac
ttctcttgcagaaagcatggagccaatagagcagatgttcatagtgcaagcacatcttca
aggctagatgcgatcaggaatgtctatggggtttctgtcgtccgtgatctgatggaaata
gaggtttcagatgagaatgctgtagatggaatattcacgatggatggtttcatctcaaat
gcaaattatgtggcaaagaagactaccatgattcttttcataaatgataggcttgtagat
tgcacttctttgaaaagagctattgaatttgtgtattctgcaatattacctcaagcatcc
aaacccttcatatacatgtccatcaatcttccacgagaacacgtggatgtcaatatacat
ccgaccaaaaaagaggttagcctcttgaatcaagagcatattattgaaactattaaagat
gctattgaggaaaagctgatgaattctaataccacaaggatattccaaactcagacggta
aactcttccgcacttgctcaagctaacacacaaaaggaaaagggtactgatgtcagcact
gctactggagcaaaatctcaaaagattcctgtgagccaaatggtcagaacagatccacta
gatccatctggaaggttgcacacttattggcatgggcaatcttcaaatcttgaaaagaaa
tctgaccttgtttccgtaagaaatgttgtaagatcaagaagaaatccaaaagatgctggt
gatttgtccagtcgtcatgagcttcttactgaaatagattccaacttacatcctggcctt
ttggatattgttaagaattgcacatatgttggagttgctgatgaagtttttgctttgata
caacacaatacccgcttataccttgtgaatgtgataaatgtcagtaaagaactcatgtac
cagcaagctttgtgccgttttggaaacttcaatgctatacagctcagtgaaccagctccg
cttcgggagttgctgacgatggcactgaaagatgatgaatcgatgcgtgatgaaaatgat
aaggagaaacttgaaattgcagaagtgaacactgagatactgaaagaaaatgctgagatg
attaatgagtacttctctattcacattgaccaaggtggcaacctgaccagacttcctgtt
gtacttgatcagtacacccctgatatggaccgccttccagaattcatcttgactttggga
aatgatgttacatgggacgttgagaaagagtgcttcagaacagcagctgctgctattgga
aacttctatgcacttcatcctcccatccttccaaatccatctggcaatggcattcagtta
tacaagaaaaataaagatcagatggcaagtggcgaacatgctgataatgatctaacaagt
acagaagaagatgacgttgaccaagagctgcttgcggaagcagaagcaacatgggctcaa
cgcgagtggaccattcaacatgtcttgtttccgtccatgcgacttttcctcaagcccccg
aagtcaatggcaacagatggaacgtttgtacaggttgcctctctagagaaactctacaag
atttttgaaagatgctag
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