Brachypodium distachyon (stiff brome): 100845488
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Entry
100845488 CDS
T01717
Name
(RefSeq) cyclin-T1-4 isoform X1
KO
K15188
cyclin T
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100845488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100845488
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
100845488
Brd4/P-TEFb complex
100845488
7SK RNP complex
100845488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
Ldh_1_C
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
100845488
NCBI-ProteinID:
XP_003568232
UniProt:
I1HIC6
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Position
2:complement(19561609..19568669)
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AA seq
583 aa
AA seq
DB search
MDMPPSDLSHHGIVENSPYRITKGGNEEAAKVGASWYFSRKEIEENSPSKRDGIDLKKES
YLRKSYCKYLQELGMRLKVPQATIATSIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVE
ETPRPLKDVILVSYELIHKKDPAAGQKIKQREVYDRQKELILLGERVVLATLGFDLNVHH
PYKPLVAATKKYKISDKGFFQIAWNFVNDGLFTSLCLQFKPHHIAAGALFLAGKFLKVKF
LPDDSEKTWYREFDVTPRQLEEISNQLLELYEQKRAVQSQPSHGNEAEKSSACVPNQRAC
IKAQDNSEEPHVLGNHQASKQSDTNHSTSTIVPIHNGAEHSNRDKQIVSQKILQIEKGDH
GSDKTSSLSGVKVNTGIDDGLHHDTKSLPGSSISIDKSDIPTEEQKSLASHGSFSETRDG
NLINSGGPSVSSSMMDAMNKIDKEKVKAALEKQRKLKGDVAMHADVMDDDDLLESELEHG
VELAVEDEKIEKEKSHGHLHQKDDQNTDAAAENRDHIEKNVPDTAKEAEVTVDVTEQRSP
TKRSDSLEPKSQQPHDAPQHSEGHDDAQLVVTDEEHKMPRPEG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatatgccaccaagtgatttgtcgcatcacggaattgtagaaaatagtccctacagg
attaccaagggtgggaatgaggaagctgccaaagttggcgcctcatggtatttcagtaga
aaggaaatagaagagaattctccatccaagagggatggcattgatttgaagaaagagtct
taccttcggaaatcatattgcaagtatctacaagaattagggatgcggcttaaagtgcct
caagcaacaattgctacgtctattgtattctgtcaccgtttttaccttcgtcaatctcat
gcaaaaaatgatagacgtacaattgctactgtttgcatgttcttggctggaaaagtcgaa
gaaacacctaggcctttgaaggatgtcatcctggtttcttacgagcttattcataaaaag
gatcctgctgctggtcagaaaatcaagcagagggaagtatatgatcggcaaaaagaactt
attttacttggggaacgagttgtgcttgcaacacttggttttgaccttaatgttcaccat
ccatacaagcccttggttgcagcaacaaaaaaatacaagatttctgataagggttttttt
cagattgcatggaattttgtcaatgatgggctgtttacttcactttgcctgcaattcaag
cctcatcatattgcagcaggtgctctctttttggctggtaagtttctcaaagtgaagttt
cttccagatgacagtgagaagacatggtatcgggaattcgatgtgacaccaagacaactg
gaagagattagcaatcaactgttagaactgtatgagcaaaaacgtgcagtacagtcacaa
ccttcacatggaaatgaagccgaaaagagctccgcttgtgtgcccaatcaacgagcctgc
ataaaagctcaagacaactctgaggaaccacatgttcttgggaatcatcaagcatccaaa
cagtcagacactaatcattctacctcaacaattgttccaattcacaatggtgctgagcat
tcaaatagagacaagcaaattgttagccagaaaattcttcaaattgagaagggtgaccat
ggcagcgacaaaacaagcagtcttagtggagttaaagttaataccggtatagatgatggt
ttacatcatgacacaaagtccttgccaggaagctccatttccatcgataaatctgatatt
ccaacagaagaacaaaaatctcttgcgtcgcatggtagtttcagtgaaaccagagacggc
aatctcattaacagtggtggtcccagtgtatcatcctccatgatggatgcgatgaataaa
attgacaaggagaaggtcaaggcagctttggagaagcaaagaaaattgaaaggtgatgtt
gctatgcatgcagatgtgatggatgatgatgacctacttgagagtgagcttgaacatggt
gtggaattggctgttgaggatgagaagatcgagaaggagaagagtcatggtcacctgcat
caaaaggatgaccaaaatactgatgctgctgcagaaaatagggaccatatcgagaagaat
gttccagacactgctaaagaagctgaggttacggttgatgtcacagaacagcgttctcca
accaagagaagtgacagtttggagcctaagtcccagcagcctcatgatgcaccacagcac
agcgagggccatgatgatgctcagcttgttgtaacagatgaagagcataaaatgcctcga
cctgaaggttga
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