Brachypodium distachyon (stiff brome): 100845498
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Entry
100845498 CDS
T01717
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100845498
03036 Chromosome and associated proteins [BR:
bdi03036
]
100845498
Spliceosome [BR:
bdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100845498
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
100845498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
NRDE-2
UTP6_C
U3_assoc_6
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
100845498
NCBI-ProteinID:
XP_010234254
UniProt:
I1I0G3
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All DBs
Position
3:complement(12131425..12140815)
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AA seq
833 aa
AA seq
DB search
MATAPMEEDLPEAAAAAGVAEDAGEGEKPAEGLPADSDSDSSDSDDDDAGGDGGEELRIQ
ALERALQEHPLYESYVQLIHCLRKSGNIEKLRAAREEMNKYFPLTPKMWQDWAKDEISLS
SGPESFSDIEKLYEHGVQEYLSIKLWRDYLDYVEENDQSVSQCSPSGLSKMRDLHERAIT
AGGLHVTEGSKLWEAYREYEMAILTIIDGNDEEKQKQSQRVRVLFHRQLSVPLAHLDSIL
AAYKSWEAEEGNANDPESEFDGVPPNVVSAYRKANEIYNARKQYEDQLNNVSASDADKLQ
AFLKYIKFEESCGDPARVQVLYERAVSEFPVSNDLWMGYMSYLDRTLKVPAVLKSVYHRA
TRNCTWVSDLWIRYLLSLERIHASEDELRHVFEQAIRCSFPMKEYLDIYLTRVDSLRRRM
PAGLDFQLIRQTFVDAAEFLSPHLGIEELLPFNAYWARLECNIGKDLAAGRGVWENALKK
SGSCLEVWQHYISMEIEMGHTQEARSLYKRCYSKKFAGSGSEVICYSWIRFEREYGTLDD
YDLAVKKVTPRLKELMMFKAQQDAKSDPYSVPKETSYANDSSQKRKPSKMTSKVQPPAKK
RKDNPPKNTVSSDDHGLKEPSTNNSVQEAGKASREKAEASMESSQGGNKSSNQPKPYLYS
DKCTAYMSNIDLTATEMHIRRFFSDIGGVADIRLLRDRFTKKSRGLAYVDFLDKEHLEAA
IKKNKQKLLSKKVSIAHSDPSKSKKNREAGTSSKGQDKLPSEGEHGEKPPVAAGSSDKEM
PKGDTKTKAKNMLFAPRAVMKPRGWNKKDDEKPDVAPEELKSNDEFRNLLLKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgcccatggaagaggacctgccggaggcggcggcggccgcgggcgtcgcc
gaagatgctggtgaaggggagaagcccgcagagggtttgcccgcggactctgactcggac
tcgtcggactccgacgacgacgacgcaggcggcgatggcggcgaggagctccggatccag
gccctggagcgcgccctccaggagcatcccctctacgagtcctacgtgcagttgatacac
tgcttgaggaaatctgggaatatcgagaagcttcgtgctgcaagggaggagatgaataag
tacttccctctcacaccaaagatgtggcaggattgggcaaaggatgaaatctcattgagc
tctggtcccgaatctttcagtgatatcgaaaagttgtatgaacatggggtgcaagaatat
ctgagtattaagttatggcgtgattacctggactatgttgaggagaatgatcagtcggtt
tcccaatgttcgccatcgggcctctcaaaaatgagggatttgcacgagcgtgccatcact
gcaggggggctgcatgtaactgaaggaagcaaactatgggaagcttacagggaatacgag
atggcaattctgaccataattgatggcaatgacgaggagaagcaaaagcaaagtcaacgc
gtacgcgtgctcttccatcgtcagttatccgtgcctctggctcatttagattctatcctt
gctgcttataagagctgggaagctgaggaaggcaatgcgaatgatccagaatctgaattt
gatggtgtgccacctaacgtagtatctgcttacagaaaggctaatgaaatatacaatgca
cggaagcagtatgaggatcaactgaacaatgtatctgcatccgatgctgacaaactgcag
gcttttctgaaatacatcaaatttgaggagtcttgtggtgaccctgctcgtgttcaagtt
ctgtatgagcgggctgtttctgagtttcctgtttcaaatgatctgtggatgggatacatg
agttacctggacagaaccctgaaggtacctgctgtactcaaaagtgtttaccacagagcc
acaagaaactgtacgtgggttagtgatttatggatccgttacttgctgtctttggagcgt
attcatgcctctgaagatgaactgcgacatgtctttgagcaggccattcgttgttctttt
ccaatgaaagagtatctcgatatttatcttacccgagttgatagtttaagaagacggatg
ccagctggcttggatttccaactgattaggcagacattcgtggatgctgctgagtttctc
tcaccacatctaggaattgaggagttactacccttcaatgcatactgggccagattagag
tgtaatattggcaaagatctagctgcaggccgtggagtttgggaaaatgctctcaagaaa
agtgggtcatgtttggaagtctggcagcactatatttcgatggagatagaaatgggacat
actcaagaggcaagatcactttacaagcgttgctacagcaaaaaatttgcagggtctgga
tcagaggtcatatgttattcgtggattagatttgaaagggagtatggcaccttagatgat
tatgaccttgctgtaaaaaaggtcacccctcgtttaaaggagcttatgatgttcaaggct
cagcaggatgctaaatctgatccttattctgtccccaaagaaacttcttatgcaaatgat
tcctcacagaaaagaaagccaagtaaaatgaccagcaaagtgcagcctcctgctaagaaa
aggaaagataatccacctaaaaacactgtgtcatccgatgaccatggattaaaggaacca
agcacaaacaatagtgttcaagaagctggaaaagccagcagggagaaggctgaggcatca
atggagagcagccaaggaggaaataaaagttcaaatcaaccgaagccttacctctacagt
gacaaatgcactgcttatatgtcaaatatagacttgacagcaactgagatgcatatccgc
cgtttcttttctgacattggtggcgtggcagacatacggttactgagggacagattcacc
aaaaaatcaaggggtttggcgtatgtagactttttagacaaagagcatcttgaggcagcc
attaaaaagaacaagcagaagttgctcagtaagaaagtaagtattgcccactcagatcca
agcaagagtaagaagaaccgtgaagcaggcacttcctccaaaggccaggataagttgcct
tctgaaggtgaacacggtgaaaaaccgccagttgctgctggtagttcagacaaggaaatg
cccaaaggtgacacgaaaaccaaagcaaagaacatgctgttcgccccacgagctgtgatg
aaaccacgcggatggaacaagaaggacgatgagaaacccgatgttgctccagaagagttg
aaatcaaatgatgagttcagaaatctgctgcttaagaagtga
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