Brachypodium distachyon (stiff brome): 100845559
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Entry
100845559 CDS
T01717
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100845559
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
100845559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
100845559
NCBI-ProteinID:
XP_003581104
UniProt:
I1IWP1
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Position
5:complement(6917177..6926492)
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AA seq
729 aa
AA seq
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MSAAAGPSMPMAAGLLALAEEAERRRDFSTATLCLESALTPPHAASLLPLAEARARLRLA
GLLLARYKGLASAKAHLERALLVLNPLPSAPPRLKLLAHSLLANVYGLLGSVPSQKHVLR
RGLGLLASVSSSGLLPAGPSLLWTSNFHAQLASALAVDGDPLSALSSLSAGAAAAAELQS
PQLDLFFAATALHVHLICWEDSAAVEAAVVRISGLWDALPAEQKDHWVGLFFYTELLQTF
YLLRICDYKAASKHVERLDTAVKSEMQRGRRIKELGTELSSVERTLAQPMLKEREREALA
HKQWQLKAHLRSLCSYDTVNDVLDYGDKFLLAPPPMHGEWLPRTAVFVLVDLMVVMVGRP
KGIFKDCRKRIQSGLQLIHEELLKLGIVDGVTEANLEHSTIWTAGIYLMLLLQFLENNVA
VELTRSEFVEAQEALAQMKTWFTRFPTILQGSESTIEMLRGQYAHSVGCFDEAAFHFLEA
LRLTENKSMQYMCQVYAAVSYICKGDAESSSQALELIGPAYRTMDSFVGVREKTCIIFVY
GLLLMRQNNPQEARVRLASGLRIAHQQLGNIQLVSQYLTILGTLALQLHDTGQAREILKS
SLTLAKTLYDIPTQIWILSVFTELYRELEERENEMENSEYGSKKEIDLQRRLTEARSHTF
HQELVEKVRIQVEPLHGLLQKHQEIPAGSAANNDLDIPESVGLSAPQPSSIKRLVDPSSA
RRSTRRRVS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccgccgggccgtcgatgccgatggcggccgggctcctcgcgctggcggag
gaggctgagcgccggcgcgacttctccaccgcgaccttgtgcctcgagtcggcgctcacc
ccgccgcacgccgcctcgctcctcccgctcgccgaggcccgcgcgcggctgcgcctcgcg
ggcctgctgctcgcccgctacaaggggctcgccagcgcaaaggcccacctcgagcgcgcg
ctgctcgtcctcaacccactcccctccgcgccgccgcgcctcaagctcttggcgcactcc
ctcctcgccaacgtctacggcctactcggctccgtcccgtcgcagaaacacgtgctccgc
cgtgggctaggtctcctcgcgtccgtctcctcctcgggtctcctccccgctgggccgtcc
ctcctctggaccagtaacttccacgcgcagcttgcctccgcgctcgccgtcgacggggac
cctttatctgccctctcctctctctctgccggagccgcggccgctgccgagcttcaaagc
ccccagcttgacctcttcttcgctgccaccgcactccacgtccacttaatttgctgggag
gacagcgccgctgttgaggctgctgtcgtccgcatctccggcctctgggatgcactcccc
gccgagcagaaggaccactgggttggactcttcttctacacggagcttctccagaccttc
tacctgctgaggatctgtgactacaaggctgcctcaaagcatgtggagaggctggacact
gctgttaagagtgagatgcagaggggccggcgtatcaaagaacttggtacggaactcagt
tcagtggagagaacgctagcccagcccatgttgaaggagagggagagagaagcgctggcg
cataagcagtggcagttgaaagctcatctgagatcgttgtgcagctatgacactgtgaat
gatgtgttggattatggggataagtttctgttggcaccaccgccgatgcatggggaatgg
cttccgcggactgcggtgtttgtgttggtagatctcatggttgtcatggtcggccggcca
aagggcatatttaaggattgcaggaagagaatacaatcaggactgcagctcatccatgag
gaactcctaaaactcgggatcgtggatggtgtgacagaggcaaatttggaacactccacg
atatggacggccgggatttacctgatgcttttacttcaatttctcgaaaacaatgttgct
gtagaacttacgagatcagaatttgttgaagcccaagaggctttagcacagatgaaaact
tggtttacccgttttccaacaattctccaaggtagtgaaagcacaattgaaatgctaagg
ggacaatatgcacattctgttggctgctttgatgaggctgcttttcacttccttgaagca
ttaaggctgacagagaataaatcaatgcaatatatgtgccaagtttatgcagcagtctcc
tacatttgcaagggagatgcagaatcatcttcacaggcgctagaattgattggtcctgct
tacagaaccatggactcatttgttggcgtacgtgaaaagacctgtattatttttgtgtat
ggacttctacttatgagacagaataatccacaagaagcacgggttcgccttgcaagtggt
ctgagaatagcacaccaacagttgggcaacatccaattggtttctcagtatttaacaata
ctaggtacattagcacttcagctacatgacactggacaggctagagagatattgaagtca
tcgttgacgttagcgaagacgctatatgacatcccaacacaaatctggatcttgtcagta
tttacagagttatatcgagaattggaagagagagaaaatgaaatggaaaactccgagtat
ggaagtaagaaagaaatcgatcttcagagaagactgactgaagctcgttctcacactttt
caccaagagctggtggagaaagtcagaatccaagttgagccattgcacggtttactccag
aagcaccaggagattcctgcaggctcagcggcgaataacgacctagacatacctgaatct
gtggggttgtccgctccccagccttcgtccatcaaaaggctggtcgacccaagttcggca
agacgcagtaccaggaggcgggtgtcgtga
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