Brachypodium distachyon (stiff brome): 100845565
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Entry
100845565 CDS
T01717
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100845565
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100845565
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100845565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
PHD
zf-RING_4
zf-ANAPC11
zf-C3H2C3
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
100845565
NCBI-ProteinID:
XP_003581622
UniProt:
I1IWJ0
LinkDB
All DBs
Position
5:complement(5803692..5809652)
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AA seq
270 aa
AA seq
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MSPRFLLLLLAAAVRPCAGLVRLRGSSFLDAPARFGPRVSGDGICGSLRSADPSDACTPI
KNSAGSGGRAFVLVVRGNCSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIP
AVFLSKMAGETLKKFARGEDSECCIESSMDETAGTVLVMSFVSLVVIISVLASFLFARNC
RLLRHGVDNRPPYIKKHVVDKLPCLVYKAPCSSGSTSEDACAICLEDYDNGDMLRLLPCR
HEFHTVCVDPWLTKWGTFCPVCKLEVITGE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcttccttctccttctcctcgccgccgccgtccgcccctgcgcgggtctt
gtccgcctccgcggtagctccttccttgacgcccccgcgcgcttcgggccccgcgtgagc
ggcgacgggatatgcgggtcattgcgctcagcagacccctccgacgcctgcacgcccatc
aagaacagcgccggctcgggtgggagggcgttcgtgctggtcgtccgggggaactgcagc
ttcgaggacaaggtgcgggaggcgcagagagcgggcttcaacgccgttgtagtgtacgac
gacgaggagaaggccagcctctactccatggttggtgattctgagggcatacacatacct
gcggtattcctatccaaaatggctggggaaactttgaagaagtttgctagaggtgaagat
agtgagtgctgcatagaatcttcgatggatgagactgcagggacggtgttggtaatgtca
ttcgtatcacttgttgtcatcatatcagttttggcttcatttctctttgctcggaactgc
cgacttctacggcatggagttgataatcgcccaccttacatcaagaaacacgtggtggat
aagcttccttgcttggtgtataaagctccctgctcaagtggaagtacttctgaagatgct
tgtgccatttgtttagaagactatgataatggtgacatgcttagacttctcccgtgcaga
catgaatttcacactgtgtgtgttgatccatggctgacaaagtggggcaccttttgccca
gtatgcaaacttgaagtaatcacaggtgaataa
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