KEGG   Brachypodium distachyon (stiff brome): 100845615
Entry
100845615         CDS       T01717                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03083  Polycomb repressive complex
bdi04120  Ubiquitin mediated proteolysis
bdi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100845615
   04120 Ubiquitin mediated proteolysis
    100845615
  09126 Chromosome
   03083 Polycomb repressive complex
    100845615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100845615
   04121 Ubiquitin system [BR:bdi04121]
    100845615
   03036 Chromosome and associated proteins [BR:bdi03036]
    100845615
Membrane trafficking [BR:bdi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    100845615
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     100845615
   Cul7 complex
     100845615
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100845615
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     100845615
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF3140
Other DBs
NCBI-GeneID: 100845615
NCBI-ProteinID: XP_003574990
UniProt: I1I9T6
LinkDB
Position
3:45207472..45208673
AA seq 162 aa
MAESDTKKMILLRSSDGKEFEVEEAVAKESRTILHMIEDDCADNGIPLPNVDAKILTKVI
EYCKKHAAAADPSAADSNSTAAADLKEFDADFVKVDQAVLFDLILAANYLDIKGLLDLTC
QTVADMIKGKTVEEIRTKFNIKNDFTPEEEAEIRKENQWAFE
NT seq 489 nt   +upstreamnt  +downstreamnt
atggcggagagcgacacgaagaagatgatcctcctgaggagctccgacggcaaggagttc
gaggtggaggaggcggtggccaaggagtcgcggaccatcctccacatgatcgaggacgac
tgcgccgacaacggcatcccgctccccaacgtcgacgccaagatcctcaccaaggtcatc
gagtactgcaagaagcacgccgccgcggccgatcccagcgccgcggactcgaacagcacg
gccgccgcggacctcaaggaattcgacgccgacttcgtcaaggtcgaccaggccgtcctc
ttcgacctcatcctggctgccaactacctcgacatcaaggggctgctggacctcacctgc
cagaccgttgccgacatgatcaagggcaagaccgtcgaggagatccgcaccaagttcaac
atcaagaacgacttcacccctgaggaggaagcggagatccgcaaggagaaccaatgggct
tttgagtag

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