Brachypodium distachyon (stiff brome): 100845791
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Entry
100845791 CDS
T01717
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
bdi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100845791
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100845791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100845791
04131 Membrane trafficking [BR:
bdi04131
]
100845791
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bdi04091
]
100845791
Chaperones and folding catalysts [BR:
bdi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
100845791
Membrane trafficking [BR:
bdi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
100845791
Autophagy
ER-phagy
Other ER-phagy associated proteins
100845791
Lectins [BR:
bdi04091
]
L-type lectins
100845791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
OAD_gamma
CFAP143
Motif
Other DBs
NCBI-GeneID:
100845791
NCBI-ProteinID:
XP_003567632
UniProt:
I1HBF9
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All DBs
Position
2:complement(920680..923869)
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AA seq
538 aa
AA seq
DB search
MTTAWRALLLLVVSAVLVQIRASEPLLYEPFDESFEGRWVVSGKDEYKGVWKHAKSDGHE
DYGLLVSEKAKKYAIIKELDFPVTLKDETVVLQFEVRLQNGLECGGSYLKYIRLQDSTWD
AKEFDNETPYSIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYT
AILKPDNEVRILIDGEEKKKANFLSADDFEPALIPPKTIPDPDDKKPEDWDERAKIPDPD
AVKPEDWDEDAPMEIVDEEATKPEGWLDDEPEEIDDPEAAKPEDWDDEEDGEWEAPKIDN
PKCEEAPGCGEWTKPMKQNPAYKGKWHAPLIDNPNYKGVWKPQEIPNPDYFELDKPEFDP
IGAIGIEIWTMQDGILFDNILIADDEKVANSILEKTWKPKYDLEKEKEKAEEEAAAGPST
LSDLQKKVFDVLYKIADIPFLEPYKSKIIDVIEKGEKQPNITIGVLVSIVVVFVTVLFKI
LFGGKKPAAVPVKPAAVSKKPQPATTDAAGSSGADKEEEKEDEKDGTAAPRRRSRRET
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcatggcgcgcgctgctgctactggttgtctcggcggtgctcgtccagatc
cgcgcctctgagccgttgctctacgagccgttcgacgagagcttcgaggggagatgggtc
gtctccggcaaggacgagtacaagggtgtatggaagcatgccaagagtgatggacatgag
gactacggtctccttgttagtgagaaggccaagaaatatgccataattaaggagctggat
ttcccagtcactttgaaggatgagacagttgtcctgcagtttgaagtgaggcttcagaat
ggccttgagtgtggaggttcctatcttaagtacattcgccttcaggattccacgtgggat
gccaaggagtttgataatgagactccttactcaattatgtttggtcctgacaaatgtggt
tcaaccaacaaggtgcacttcattctgaagcacaagaatcccaagactggcaagtatgtt
gaacatcatctcaagttcccaccatctgtaccatatgacaagctctcccatgtctacacg
gctatcttgaagccggataatgaggtgagaattttgattgacggggaggagaaaaagaag
gcaaacttcctgtctgctgatgattttgagcctgcccttatcccacccaagaccattcct
gaccctgatgacaagaagccagaggactgggacgagagagctaaaatccctgatccagat
gctgtgaagcccgaggactgggatgaggatgccccaatggaaatcgttgatgaggaggcc
accaagccggaaggatggttggacgatgagcctgaagaaattgatgaccctgaagctgcc
aagcctgaagattgggatgatgaggaagatggtgaatgggaggcaccaaagattgacaac
cccaagtgcgaagaggcacctggatgtggcgagtggacaaagcctatgaaacagaatcct
gcttacaagggcaagtggcatgcacctctgattgacaaccccaactacaaaggagtgtgg
aagccccaagagatccccaaccctgactattttgaactagacaagcctgagtttgatcca
attggagctattgggattgagatctggacaatgcaagatggcattctttttgacaacatt
ttgattgctgatgatgagaaggttgccaactctatcctagagaagacatggaagcccaaa
tatgaccttgagaaagaaaaggagaaggctgaggaggaggctgctgcaggtcctagtact
ctttctgatttacagaagaaggtttttgatgttctttacaaaattgctgacattccattc
ttggaaccttacaagtcgaagatcattgatgtaattgagaagggtgagaagcagcccaac
atcacaattggagttttggtgtcgattgttgtcgtctttgtgaccgtgcttttcaagatc
ctgttcggcggcaagaagccagcagcggtccctgtgaagcctgctgctgtctccaagaag
cctcagcctgctacgacagacgcagctggaagcagcggcgccgataaggaggaggagaaa
gaggacgagaaggatggaactgccgccccacgcaggaggtcccggagggagacgtag
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