Brachypodium distachyon (stiff brome): 100845868
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Entry
100845868 CDS
T01717
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100845868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100845868
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100845868
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100845868
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100845868
NCBI-ProteinID:
XP_003581134
UniProt:
I1IX02
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All DBs
Position
5:10144689..10147377
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AA seq
349 aa
AA seq
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MKNVSLKGNSLVLTDEAALTPNLRKTSHRAHALQSFPSHKPLLNPPSINPQRPSKSNYPM
SHPMAEEEEGKMAKQLGGGAASAEWGSRGEISVKIDSRVLLCRICSQPLKPPIFKCEAGH
VLCSRCLEKLHEVGYVLKLGVFCVLCCKNTSYCRCIEIEEFIDAVKVPCSNKIYGCSEFI
KYFQKEKHESGCTHAPCYCPENGCTFVRPTGSLLNHFVDVHGWSPTYFRYNKPLKISMAL
DCRFTLLLGEDQSMFLLTNTLTDIGHALTVVCVRPHQSEPSYSCNISSTCSVSGSKAEGR
LVFQKDPLVSSSSLLAGVQMGKFFLLVPPELVDESSGELIIHIRIDRLA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgtgtcgttaaaaggcaactctttagtcttgacggacgaggccgccctgaca
cccaacctccgcaaaacctcccaccgtgctcatgctttgcaatctttcccctcccacaaa
cccctcttgaatcctccatcaatcaatccccagcgccccagcaagagcaactatcccatg
tcccatcccatggcggaagaggaagaaggcaagatggcgaagcagcttggaggcggagcg
gcgtcggcggaatgggggagccgcggcgagatttccgtcaagatagactcccgagttctc
ctctgcaggatctgctcccagcccctcaagccgcctatcttcaagtgcgaggctgggcac
gttttgtgttctcggtgcctggaaaagctccacgaggttgggtacgtgttgaagttgggc
gtcttttgtgttctctgttgcaaaaacactagctattgtcgctgcattgaaattgaggaa
ttcatcgatgccgtcaaagtgccgtgttccaacaaaatatatggctgcagtgagttcatc
aagtacttccagaaggagaagcatgaaagtggatgtacacatgcaccatgctactgccca
gagaatggctgcactttcgtacggccaactggttctcttctgaaccactttgtcgacgtg
catggatggtcaccgacctacttccgttacaacaaaccgctcaagatctccatggcacta
gactgccggtttacgctgctcctcggggaagaccaatccatgttcctcctaaccaacact
ctgaccgacatcggccatgctctcacggtggtctgtgtcaggcctcaccaatctgaaccg
agctattcatgcaacatctcgtctacctgcagtgtttctggtagcaaagccgaagggagg
cttgtgttccagaaggatcctcttgtatcaagcagctcgctgttggctggggtccagatg
ggcaagttcttcctgctggttcctccggaactcgttgatgaatcatctggtgaactcatc
attcacattcgtatcgacaggctggcatag
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