Brachypodium distachyon (stiff brome): 100845881
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Entry
100845881 CDS
T01717
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100845881
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100845881
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100845881
NCBI-ProteinID:
XP_003563839
UniProt:
I1GYF0
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Position
1:complement(37702801..37704542)
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AA seq
427 aa
AA seq
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MALSGNAIRVLFILVILCVAAHGKAAEKKEKKEEKGGKDKEADAEGPAAEGPSSGGGELD
ISKSGKCKGDGKADCTEALEEAWASACKGTGKQTIQIPKGDYLTGPLNFTGPCTGDVTIQ
LDGNLLGSTDMALYKSNWIEIMRVENLVISGKGTLDGQGPKVWSKNACAKKYDCKILPNS
LVLDFITNGTISGITLLNAKFFHMNVFQCKGVTIEDVTVTAPGDSPNTDGIHIGDSSGIT
ITGTTIGVGDDCISIGPGSTKINITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLK
KATNGLRIKSYQSAESSLTASEIHYENVNMEDVANPIIIDMNYCPNKICPAKGSSHVTIK
DVTFKNITGTSSTPEAVSLLCSDKLPCSGVELNDVKVEYSGKNNKTMAVCKNAKGTAKGC
LEALACL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagcggtaatgctatcagggtgttgttcatcctggtgatcctttgcgtcgcc
gcgcacggcaaggccgccgagaagaaggagaagaaggaggagaaggggggcaaagacaag
gaggcggacgcggagggccctgcggcggagggcccgtcgtccggcggcggcgaattggac
atcagcaagtccggcaaatgcaagggcgacggcaaggcggactgcaccgaagctctggag
gaggcgtgggcgtcggcttgcaagggcaccgggaagcagacgatccaaatccccaagggc
gactacttgacgggtcccctcaacttcaccggcccgtgcacgggcgacgtcaccatccag
ctcgacggcaacctgctgggctccactgacatggcactctacaagtccaactggatcgag
atcatgcgcgtcgagaacctcgtcatcagcggcaaaggcacgctcgacggccagggcccc
aaggtctggagcaagaacgcctgcgccaagaaatacgactgcaagatcctgccaaattcg
ttggtgctggactttataaccaatggcaccatatccgggatcacgctcctgaacgccaag
ttcttccacatgaacgtgttccaatgtaagggcgtgaccatcgaggacgtgaccgtgacc
gcccccggggacagccccaacacggacggcatccacatcggcgactcgtccgggatcacc
atcacaggcaccaccatcggcgtcggcgacgactgcatctccatcggcccgggaagcacc
aagatcaacatcaccggcgtcacctgcggcccaggccacggcatcagcatcggcagcctc
ggcaggtacaaggacgagaaggacgtgaccgacatcaacgtcaaggactgcacgctcaag
aaggccaccaatggcctccggatcaagtcctaccagtccgccgagtcctcgctcacggcc
tccgagatccactacgagaacgtcaacatggaggacgtggccaaccccatcatcatcgac
atgaactactgccccaacaagatctgccccgccaagggcagctcccacgtcaccatcaag
gacgtcaccttcaagaacatcaccggcacctcctccacgccggaggccgtcagcctgctc
tgctccgacaagctgccctgcagcggcgtcgagctcaacgatgtcaaggtcgagtactct
ggcaaaaacaacaagaccatggccgtctgcaagaacgcaaagggcactgccaagggatgc
ctcgaggcactggcttgcctttga
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