Brachypodium distachyon (stiff brome): 100846027
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Entry
100846027 CDS
T01717
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g22070
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100846027
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100846027
Membrane trafficking [BR:
bdi04131
]
Endosome - Golgi transport
Others
Others
100846027
Transporters [BR:
bdi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
100846027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
DYW_deaminase
E_motif
PPR_1
PPR_3
PPR_long
Eplus_motif
DUF885
Motif
Other DBs
NCBI-GeneID:
100846027
NCBI-ProteinID:
XP_024312943
LinkDB
All DBs
Position
1:52056820..52063476
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AA seq
685 aa
AA seq
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MRYAARKAAAALQSPPTLSSTSSAPLLQRSQSLCASAPEKGLARISQEIVSLPISCVRGH
HFHNARKLLDETPKRSASAWTAFIAGCARSGRHMDGLSAFTEMRAKGGAEPNAFVLAAVL
RCCAGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDYECTKRAFKAMTKIDAV
SWNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARAR
VVFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAV
LIFDSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAACA
NAGMVEQGRIFDRACAKNVALWTSMLCSYASHGKGRMAIELFNRMTAEKITPNEITLVGV
LSACSHGRLVNEGDHFFKLMQDEYGIVPSIEHYNCMVDLYGRAGMLYKAHNFIKENNIKH
EAIVWKTLLSACRLHKHMEYAKLASENLIQLEECDAGSYVMLSNVYATHSKWLDTSKLRS
SMRERRVWKQPGRSWIHLKNIMHTFVAGDTAHPRSAEIYAYLEKLMERLKDLGYTSRTDL
VAHDVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCVDCHEAIKYVSQATD
REIVVRDLYRFHHFKDAKCSCEDFW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacgcggcgaggaaagctgcggctgcgctgcaatcgccgccgacactctcgtct
acctcctccgcaccgctcctccagcggtcccaatccctctgtgctagcgcgccagaaaaa
ggattggctcggatttcccaagaaatcgtctcccttccgatctcctgcgtgagaggccat
cacttccacaatgcacgcaagctgcttgacgaaaccccaaagaggagcgcgtccgcgtgg
acggcgttcattgcgggctgtgcgcgcagtggtcggcacatggacggcctgagcgctttc
acggagatgcgagccaaaggtggagctgagccaaatgcgtttgttcttgccgccgtcctc
aggtgctgtgctggtctccgcgacatggagtcgggtaagtgcatccacggatggatgctg
aggaatggagcgcatctcgacgttgttctgtgcaatgctgttcttgatatgtacgccaag
tgtggcgactatgagtgcactaagcgggcatttaaagcaatgaccaagattgatgccgtc
tcctggaacattgtgatcagtgcatgtatgcagaatggtgacattcttgggtcgatgcag
ctgttcgacgtatccccattgcgggacacttcaagctggaacactgtcatcagcggcttg
atgcggaatgggtgtgctgccaaggcgctggactgcctgtatcgtatggcacgagctaga
gtggtctttaatcactacacatactctacggcacttgccttggctggcatgctttccttg
caagaccttggccggcagctccacggccgcgtgctgacagctgcagtggacactgacgca
tttgtccggagctctctcatggacatgtactgcaagtgcggttcaatggagactgctgtg
ttaatctttgatagctggtcacagcttactggggacatgaactttgcatggagcgcaatg
gtcgctgggtatgtccagaatggcagggaggaagaagctttcgagttcttccgctcgatg
ttgcgtgaaggggttgctgcacatcagttcaccctcaccagtgcaattgcagcgtgtgca
aatgcagggatggttgagcaaggcaggatatttgacagagcttgtgccaagaatgttgct
ctctggacttcaatgctgtgctcctatgcatcacacgggaaaggcaggatggcgatagag
ctcttcaaccgaatgactgcagaaaagatcacaccaaatgagattaccctggtcggtgtt
ctatctgcctgtagccatggcagattggtcaatgaaggagatcacttcttcaagctaatg
caagatgagtatggaattgttccaagcattgagcattacaattgcatggttgatctttat
ggtcgagctggaatgctctacaaagcacataacttcatcaaggaaaacaacattaagcat
gaagctattgtttggaagacgttattgtcagcttgtcgacttcacaagcacatggagtat
gcaaaacttgcttctgaaaatttgattcagctggaggaatgtgatgctggatcatatgtt
atgctgtcaaacgtatatgccactcacagcaaatggcttgacacttcaaagcttagaagt
tcgatgcgggaaaggagggtctggaagcaacccggaagatcctggatccatttgaagaac
atcatgcatacatttgtcgcaggggacactgcgcacccaagatcagctgaaatttatgct
tacttggagaagttgatggagaggttgaaggatctggggtatacaagtagaactgatctt
gttgctcatgatgtagaggaggaacaaagggaaacggctctgaagttccacagtgagaag
cttgccattgcgtttgggatcatcagcactccaagtggaactccacttcggatcttcaag
aatctgcgtgtttgtgtggactgtcatgaagcaatcaagtacgtaagccaagccacagat
agggagattgttgtgcgagatctgtaccggtttcatcatttcaaggatgctaagtgttct
tgcgaggatttctggtga
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