Brachypodium distachyon (stiff brome): 100846037
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Entry
100846037 CDS
T01717
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100846037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100846037
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100846037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
100846037
NCBI-ProteinID:
XP_003577564
UniProt:
I1IGK4
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All DBs
Position
4:complement(1367578..1373865)
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AA seq
793 aa
AA seq
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MITGGQSYVSAPPAFSADGRLLLVCSGRVVSVFSTSTGMLVSELEGHEGDVTAVVVAPPP
ANAAAAAMVASYCWTAGLDGMLIYWDFAAAELVRKVHVGLPVHSMVVPNITRTSKVTEVY
TPFAFVSVEDTSKSANEAKALRGQLRIYDLTKGRQVGSLLAETRKPPKIVASCSGEFLGI
VNKRKLYIWSIPTKDFKPDKIRKIKLGHTKNLNTLAFHPSERIVAGGDVTGRILIWRGFG
NAKFSKAHGAKSQADEERDGVRGEDDAETCTTWHWHSSGVKFLKFASDGAYLYSGGMEGV
IVVWQLDTGKRRYKPRLGSPLLFFVGSPDSSISCVSCTNNQIHLLKMPNMVVLKTIAGIK
LPLTSPNLVRRDVYGFDCTNGLVAVPTEDYCIQFYNLFENTEVSEVQVCERNFQPVDDIT
MYISLVSLSINGNFMCTVEVKLPEEELGGLVTLKFWNHGSRAGHFHLSTVIYEPHSDAAI
SAVAFRPGKNMAVSSSVGGNFKVWVQSLSLQSSDEKSQSGWRCQSVGSYKKKPMTAAAFS
GDGSVLAVAAESVITLWDPDNNALVGVIAEALSPITKLSFGGTSAYLMSLSQSSKPQVAV
WNVSNLSMQWSYTLFAEAACSSSKGEFAVLSLLSYPEGETPAEQDGVILLFNAENSNPIL
SWSVKKAKGGSLAFVKDDISLDARGEDASLLVYVNGSHEYFIFDPRKNEESQLSKSAQKN
IQADEPASIGYAAIYGQLPKLELKKEVSDVPFIPSERPWETIFTGSSHVLPPLTKLCSVF
LASLLEKRPVANE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggtggccagagctacgtctccgcgccgccggccttctccgcggacggccgc
ctcctcctcgtctgctccggccgcgtcgtctccgtcttcagcacctccaccggcatgctg
gtgtcggagctggaggggcacgagggggacgtcacggccgtcgtggtggcgccgccgccg
gccaacgccgcggcggcggccatggtcgcgagctactgctggacggcggggctcgacggg
atgctcatctattgggacttcgccgcggccgagctggttcgcaaggtccacgtcgggctc
cccgtccactccatggtggttcctaacataaccagaacatcgaaagtaactgaggtgtat
actcctttcgcgttcgtctctgtggaagatacgagcaagtcagctaatgaggcgaaagca
ttgcgcgggcagctgaggatttatgacttgacaaaagggcgccaagtgggttctctcctg
gctgagacacgtaagccaccaaagatcgtcgcaagttgttctggggaatttttgggcatc
gtaaataagagaaagctctatatttggagcatacctaccaaagatttcaagcctgataag
ataaggaagataaagctcggccacacaaaaaacttaaataccctggccttccatccaagc
gagagaattgtggctggtggtgatgtaacagggaggatcttaatttggagaggctttgga
aatgcaaagttttccaaagcccatggtgcaaagtctcaagcagatgaagaaagggatggt
gtaaggggtgaagatgatgcagagacttgcactacgtggcattggcattctagtggagtg
aagtttctcaaatttgcttcagatggagcttacttgtactcgggtggtatggagggggtt
attgttgtatggcaactggatacaggaaagagaaggtataagccacgtctaggatctcct
cttttgttctttgtgggttctccagactcttccatttcctgtgtctcatgtacaaataac
caaattcatcttctgaaaatgcctaatatggtggtcctgaaaactattgctggaattaag
ctacctcttacttccccaaacctggttagacgagatgtgtatggatttgattgcactaat
gggcttgttgcagtaccaacagaagattactgcatacagttctacaatttgtttgagaac
actgaggtttcagaggtgcaagtttgtgagaggaactttcagcctgttgatgatatcacg
atgtacatttctttagtttcattgtccatcaatggcaattttatgtgtactgttgaggtt
aagcttcccgaagaagaattaggtggccttgtcacactgaaattttggaaccatgggtct
cgtgctggacattttcatttgtccaccgtcatttatgagcctcacagtgatgctgctatt
tctgccgttgctttccgcccaggaaaaaacatggccgtgagctcttctgttggtggcaac
ttcaaggtgtgggtccaaagtttgtctttacaatcaagtgatgaaaaaagccaatctggt
tggagatgccaatcagttggctcatacaagaagaaacctatgacagcagcagctttctca
ggtgatggatctgttcttgcggttgcagctgagagcgtcatcacattgtgggaccctgat
aataatgcacttgttggtgtgattgcagaagcattatcgcctattaccaaactttctttt
ggtgggacatcggcatatttgatgtctctatctcagagttcaaaaccacaggttgctgtg
tggaatgtgtcaaatctttccatgcaatggtcctacaccctttttgcggaagctgcttgt
tcctcaagtaagggtgaatttgcggtactttctcttctaagctatcctgaaggagaaaca
ccagcagagcaagatggggtaatactacttttcaacgcggaaaattcaaacccaattttg
tcctggtctgtaaagaaggcaaaaggaggtagccttgcttttgtgaaggacgatatatct
ttggatgcaaggggtgaagatgcatcattgctggtgtatgtgaatggttcacatgaatat
ttcatctttgatccccgaaagaacgaggagtcacagcttagcaagagcgcacagaaaaat
atacaagccgatgaacctgcatcgatcggttatgcggctatttacggccaacttccaaag
ctggaattgaagaaagaggtttcagatgttccatttattccatcagagagaccatgggaa
actatattcactggatcgtcccatgttcttccgcctctcacaaaattatgttccgtcttc
ttggcatcactgctagagaagagaccagttgcgaacgagtga
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