Brachypodium distachyon (stiff brome): 100846087
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Entry
100846087 CDS
T01717
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100846087
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100846087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
100846087
NCBI-ProteinID:
XP_003566314
UniProt:
I1HK24
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All DBs
Position
2:complement(26052981..26058670)
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AA seq
459 aa
AA seq
DB search
MAEDAGDREQQQHHHHHQPAAAAGGGGGEDGSGREESSVKLFVGQVPKQMTEAELAAMFR
DVAIVDEVTVIRDKATKVSRGCCFLICPSREEADKAVNAYHNKRTLPGAPSPLQVKYADG
ELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQ
AMAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAHFQPSNMSNATAMQQNSLFG
ALQMGYMPQYNGFGYQPQGTYGLMQYPLSPMQNQAAFQNMVQPVNQGSSIRGVNSELSPN
SVTRSFNSMQLGSPYPAAPGMQYPGSYPGGAINSRPYMNSHNAIKVPNTNATSPTSSSTS
SNPGPQIEGPPGANLFIYHIPQEFGDQDLANAFQNFGRVLSAKVFVDKATGASKCFGFVS
YDSPASAQAAISMMNGFQLGGKKLKVQLKRDNSKHNKLY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacgcaggcgacagggagcagcagcagcaccaccaccaccaccagcccgct
gcggcggcgggaggtggcggcggggaggacggcagcggcagggaggagagctccgtcaag
ctcttcgtgggccaggtgccgaagcagatgacggaggcggaactggccgccatgttccgc
gacgtggccatcgtcgacgaggtcaccgtcatccgcgacaaggccaccaaggtgtcacga
ggctgctgcttcctgatctgcccatcaagggaggaagctgacaaggcagtgaatgcatat
cacaacaaacgcacacttcctggggccccaagtccactgcaagtaaaatatgccgatgga
gagttggaaagattggagcacaaacttttcattggaatgcttccaaaaaatgtaacagat
gctgaaatgactgatttattttcacaatatggcaacatcaaggatttgcagattttgaga
ggttcgcaacagacgagcaaagccggctgtgcctttctgaagtatgaaacgaaagagcag
gctatggcagctatcgaagctctaaatgggaagcacaaaatagagggttcaagtgtacct
ttggttgtaaaatgggccgacacagaaaaggaaaggcaggctcgaaaagcacaaaaagct
cattttcagccgtctaatatgtcaaacgcaactgccatgcagcagaattcgttgtttggt
gccttgcagatgggatatatgcctcagtataatggatttggctaccagccacagggaacc
tatggacttatgcaataccctttatcgcctatgcaaaatcaagcagccttccagaatatg
gttcagcctgtcaatcaaggaagctcaatacgcggcgttaattctgaactttcccctaac
tcagttactagatcatttaattcaatgcagttgggcagcccttatccggctgctcctggt
atgcagtatcctgggtcatatcctggtggtgctatcaatagtcgtccttacatgaattct
cataatgcaattaaagttccaaacacaaatgctacatctcccacatcttcaagtaccagt
agcaaccctggtccacagatagagggtcctcctggagccaatttatttatctatcacatc
ccacaagaatttggtgaccaagatctagcgaatgcatttcaaaattttggtagagtattg
agtgccaaagtttttgtagacaaagcaactggtgctagtaaatgctttggttttgtaagc
tacgattctcctgcctctgcgcaagcagccataagcatgatgaacgggttccagttaggt
ggtaaaaagctgaaagtacaactcaagagagacaacagcaagcacaataaactttattga
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