Brachypodium distachyon (stiff brome): 100846266
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Entry
100846266 CDS
T01717
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100846266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100846266
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100846266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100846266
NCBI-ProteinID:
XP_003561433
UniProt:
I1H3S4
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All DBs
Position
1:complement(56537668..56542339)
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AA seq
376 aa
AA seq
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MAAEVGDSAAAVAAAAAAGESRKLFVGGIPSSAQEGELRGHFARFGAVRSVVVMRDRETG
HGRGFGFVEFEGEDAAAKALGDGEKPKHFICGREVDVRRARVRPLRNFGEQPVHHHQPEQ
GQDQGHQDNQTAGNGVVDGDDSASYSSKKVFVGGLRDNITEDEFRAYFEAFGTVTDVVVI
YDSLTNRSRGFGFVTFDSEEAVRKVMGKSFHDLKGTRVEAKIAIPKDAHYYRNGRGRGSR
PFGMGGPASYEGLFRPYNDRHGFYNGFMPQHVPAPPYYPGLYVGMGGYPYANAYPNQGVM
PNVPSMVARRPVYSPYPPMYPGYGFPYRAGYAGPTFQHGVNGGSGYNNDQASLDVQELDS
ASTVATKFEYMKLGSQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggtcggggactcggctgcggcggttgcggcggctgcggcggcgggggag
agcaggaagctgttcgtgggcggcatcccgtcgtcggcgcaggaaggggagctccggggc
cacttcgcccgcttcggcgccgtgcggtccgtcgtcgtgatgcgggacagggagacgggc
cacggccgcggcttcggcttcgtcgagttcgagggcgaggacgccgccgccaaggcgctc
ggcgacggggaaaagcccaagcacttcatctgcggccgcgaggtggacgttaggagggcc
agggttagacctctgcggaactttggcgagcaacctgtgcatcatcatcagccagaacaa
ggtcaggatcagggccaccaggacaaccagactgctgggaacggcgttgtggacggtgac
gacagtgcgagctattcttcaaagaaggtctttgttggtggtttgagggacaacatcacc
gaggacgagttccgggcttactttgaggcgtttggcactgtaacagatgttgtggtgata
tacgacagcttgacaaacaggtcaaggggctttggtttcgtcacctttgattcagaggag
gctgtgagaaaggtgatggggaaaagtttccatgacctgaaaggaacgagggtggaagct
aagattgctatccccaaggatgctcactattaccgtaatggccgaggtcgtggctcaaga
ccctttggcatgggtggtcctgcttcctatgagggtttattccgaccgtacaatgatagg
catggcttctacaatggctttatgccacaacatgttcctgcacccccctactatcctggc
ctctatgttggtatgggaggctatccctatgcaaatgcatatccgaaccaaggagtcatg
ccaaatgttccaagcatggttgcacggcgtccagtatatagcccatatcccccaatgtat
cctggctatggttttccatacagagctggttatgcaggtcctacttttcagcatggtgtt
aatggtggcagtggttacaataatgatcaagcctctttagatgtgcaagaacttgacagt
gcttctacggtcgctacaaaatttgaatacatgaagctaggttcacaatga
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