Entry |
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Name |
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KO |
|
Organism |
bdi Brachypodium distachyon (stiff brome)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100846303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100846303
03036 Chromosome and associated proteins [BR:bdi03036]
100846303
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100846303
Chromosome and associated proteins [BR:bdi03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100846303
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
2:44767826..44773187
|
AA seq |
345 aa
MASFNAAGAGAANPNPNKSLEVNSPPGDSVSSLSFSPKANHLVATSWDNQVRCWEVQPGG
QCQAKASISHDQPVLCSAWKDDGTTVFSGGCDKLVKMWPLLSNGQPTVFSGHDAPVKELA
WIPQINLLVSGSWDKTLRYWDPRQPQPVHVQQLPERCYALSLSYPLMAVGTADRKVVIFN
LQNPQAEFKRIDSPLKFQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHR
EGNDIYSVNSLNFHPVHHTFATAGSDGGFNFWDKDSKQRLKAFSKCPSPITCSTFNQDGS
IFAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESDVKGKPRAGKK |
NT seq |
1038 nt +upstreamnt +downstreamnt
atggcgagctttaacgccgccggcgctggcgcggccaaccccaaccccaacaaatccctc
gaggtgaactcgccgcccggagattcggtttccagcctgagctttagtcccaaggcgaac
cacctcgtcgctacctcctgggacaaccaggttcggtgctgggaggtccagcctggtggc
caatgccaagccaaggcgtcgatttcgcatgatcagccggtgctgtgctcagcctggaag
gacgatggtactactgttttttcgggagggtgtgataaactggttaagatgtggccgttg
ctgtctaatgggcagcccacggtcttctcagggcatgatgcgccggttaaagaacttgcc
tggattccacaaatcaatcttcttgtcagtgggagctgggataagactttgaggtactgg
gaccctagacaacctcagccagtacatgttcagcaacttcccgagcgctgctatgctctc
tcacttagttatcctctaatggcggttggcactgctgatcgcaaagtagttatcttcaat
ctgcagaacccacaggctgaattcaagaggatcgactcacctctgaaattccagacaagg
tgtcttgctgcattccctgatcaacaagggttcttggttggatcaatagagggacgcgtt
ggtgttcatcatgtggatgactctcagcaaagcaaaaattttacattcaaatgtcaccgc
gagggcaatgatatatactctgttaactcattgaacttccatcctgtgcaccatacattt
gcaactgcaggttctgatggaggtttcaacttttgggacaaggacagtaaacaaagactc
aaggcttttagcaagtgcccatcacccattacatgcagcacattcaatcaggatggttca
atctttgcttatgcggtatgctatgattggagcaagggtgctgagaagcataatccttct
actgcaaagacaaatatctttctacatagcgtgcaggaatctgatgtcaaaggaaagccc
cgtgctggaaagaagtag |