KEGG   Brachypodium distachyon (stiff brome): 100846303
Entry
100846303         CDS       T01717                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100846303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100846303
   03036 Chromosome and associated proteins [BR:bdi03036]
    100846303
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100846303
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100846303
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st DUF5354 Ge1_WD40
Other DBs
NCBI-GeneID: 100846303
NCBI-ProteinID: XP_003569419
UniProt: I1HPR8
LinkDB
Position
2:44767826..44773187
AA seq 345 aa
MASFNAAGAGAANPNPNKSLEVNSPPGDSVSSLSFSPKANHLVATSWDNQVRCWEVQPGG
QCQAKASISHDQPVLCSAWKDDGTTVFSGGCDKLVKMWPLLSNGQPTVFSGHDAPVKELA
WIPQINLLVSGSWDKTLRYWDPRQPQPVHVQQLPERCYALSLSYPLMAVGTADRKVVIFN
LQNPQAEFKRIDSPLKFQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHR
EGNDIYSVNSLNFHPVHHTFATAGSDGGFNFWDKDSKQRLKAFSKCPSPITCSTFNQDGS
IFAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESDVKGKPRAGKK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgagctttaacgccgccggcgctggcgcggccaaccccaaccccaacaaatccctc
gaggtgaactcgccgcccggagattcggtttccagcctgagctttagtcccaaggcgaac
cacctcgtcgctacctcctgggacaaccaggttcggtgctgggaggtccagcctggtggc
caatgccaagccaaggcgtcgatttcgcatgatcagccggtgctgtgctcagcctggaag
gacgatggtactactgttttttcgggagggtgtgataaactggttaagatgtggccgttg
ctgtctaatgggcagcccacggtcttctcagggcatgatgcgccggttaaagaacttgcc
tggattccacaaatcaatcttcttgtcagtgggagctgggataagactttgaggtactgg
gaccctagacaacctcagccagtacatgttcagcaacttcccgagcgctgctatgctctc
tcacttagttatcctctaatggcggttggcactgctgatcgcaaagtagttatcttcaat
ctgcagaacccacaggctgaattcaagaggatcgactcacctctgaaattccagacaagg
tgtcttgctgcattccctgatcaacaagggttcttggttggatcaatagagggacgcgtt
ggtgttcatcatgtggatgactctcagcaaagcaaaaattttacattcaaatgtcaccgc
gagggcaatgatatatactctgttaactcattgaacttccatcctgtgcaccatacattt
gcaactgcaggttctgatggaggtttcaacttttgggacaaggacagtaaacaaagactc
aaggcttttagcaagtgcccatcacccattacatgcagcacattcaatcaggatggttca
atctttgcttatgcggtatgctatgattggagcaagggtgctgagaagcataatccttct
actgcaaagacaaatatctttctacatagcgtgcaggaatctgatgtcaaaggaaagccc
cgtgctggaaagaagtag

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