Brachypodium distachyon (stiff brome): 100846343
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Entry
100846343 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100846343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100846343
03036 Chromosome and associated proteins [BR:
bdi03036
]
100846343
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100846343
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100846343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
100846343
NCBI-ProteinID:
XP_003558704
UniProt:
I1H968
LinkDB
All DBs
Position
1:complement(70948223..70952716)
Genome browser
AA seq
1007 aa
AA seq
DB search
MALDAMFPVLRSSDYFTRPSIDELVEREAADPGYCSRVPNFVVGRARYGQVMFSGNTDVR
GLDLNEIVTFDRHCVVVYGDEAGKPAVGHGLNKAAEVMLLLDLRSLPEPSILDELLRCRT
KKQGARFLSFNPVNGYWKFEVDHFSRFGLVDEEEEDVAMDEVAARQPISEARDPPSNGYE
LELSHSLPAHLGLDPAKMQEMRMALFPNDEDDVDMEDGFPSDQRYLSRERMSVDSPNTSA
KGARLRSLSPLQGSSQKFGRRSGMLARKEPHALLEYSVNPSELGPSSHGILMSGKNKGFP
VRMAKVEGFKLPAEQATPVAGKVYSNCVVDAALFMGRSFRVGWGPNGILIHSGSLVNSPG
TGLSSVIHIEKVAGDKVVRDEQNKVKEELAELCFSDPMDLHRRLDREVLETESDSFKLKL
QKVVASRLVLPEICRSYIDIIERQLEISDLSMSLRVLLMHQVTVWELIRVLFSEKTAGNQ
LEFSGDEDQEGMIIDKKEVSVNIDLEALPLVRRADFSNWLQDSICHRVQGEVGSLSDARY
LEHIILLLTGRQLDTATEIAASRGDVRLAILLSQAGGSMLNRSDVAQQLDLWKINGLDFD
YIEEDRLRIYELLAGNIQGALLDSPIDWKRYLGLIMWYQLSPDTSLDIIIHSYHQLLGEG
KVPNPVPVYIDEGPLEEAVQWSPGDRFDLSFYLMLLHANQDEKFGLLKTMFSAFSSSYDP
LDYHMIWHQRSILEAIGAFSANDLHVLDLSFVHQLLCLGKCHWAIYVILHMPHLDDAPYI
HEKLIKEILSQYCELWSKDVAQRQYITELGIPAEWIHEALALFHEYYGDRQGALENYIQC
GNWKKAHTIFMTSVAHSLFLSSNHQEIWGITNVLENHKSEIADWDIGAGIYIDYFIIKNS
MQEESTMDDDDSDPLERKNESCKSFFGRLNDSLHIWGSKLPVEARACFSKMAEELSQLLM
NSPGEGLGPDLYMGCFHTMLNAPVPNDHKASYLQEAVSVFTDILCGD
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgacgccatgttcccggtcctgcgttcctccgactacttcacgaggccgtcg
atcgatgagctggttgagagggaggcggccgacccgggctactgcagtagggttccgaac
ttcgtcgtcgggagggcgaggtatgggcaggttatgttctccggcaataccgacgtcagg
gggctggacctgaatgaaatcgtcacgtttgaccgccattgcgtggtggtttacggggat
gaggctggtaagccggccgttggccatggccttaataaagctgcggaagtgatgttgttg
ctggatttgagaagtcttccagagcccagcatccttgatgagttgctaaggtgtcgcacg
aaaaagcaaggtgctaggttcctctcgttcaatcctgtgaatggctattggaagtttgag
gttgatcacttcagtagatttgggctagtggacgaggaggaagaggatgttgccatggac
gaggtggctgctcgacaaccgatctctgaagcaagagacccaccttcaaatggatatgaa
ctggagctttcgcattcattgcctgctcatcttgggcttgaccccgcaaagatgcaagaa
atgcggatggcattgtttcccaatgatgaagatgacgtagatatggaagatggcttccca
tctgatcagagataccttagcagagaaaggatgagtgtggattcaccaaacacaagtgct
aaaggtgcgcggctgagatctctgtcacctttgcagggttcttcccagaaattcggaagg
aggtctggtatgcttgcaaggaaagaaccacatgcattgctggagtacagtgtgaatcct
tcagagcttggcccatcttctcatggtattcttatgtctggaaaaaacaagggatttcct
gtgagaatggccaaggtagaaggtttcaaactaccagctgagcaagcaactcctgttgct
ggaaaagtatattctaattgcgtagtggatgctgctttgttcatgggtagatcatttcga
gttggttggggaccaaatggcattcttatccattctggtagtcttgtcaatagtcctgga
actggcctttcatctgttattcatatagagaaagttgcaggtgataaagttgtgcgagat
gagcagaacaaagttaaagaggagctggcagaactatgtttctcagatccaatggacctc
cacaggaggcttgatcgtgaagttctggaaactgagtctgactcgtttaaactaaagctt
cagaaagtcgtggcaagtcgtttggtcttgccagagatttgcaggtcgtatattgatatc
attgaaaggcagcttgaaatcagcgatttatctatgtctttgcgtgtgctgttaatgcat
caagttacagtatgggagttaattagggtcttgttctctgagaaaacagctggcaaccag
ttagaatttagtggtgatgaggatcaggagggcatgattatagataagaaagaagtttct
gtgaacatagaccttgaagcactccctttggttaggagagcagactttagcaattggtta
caagacagtatctgtcatcgggtgcaaggagaggtgggttccttaagtgatgccaggtat
ttggaacatattattctgcttttgactggtcgacagttggacacagccacggaaattgct
gcttcaaggggtgatgtccggttagcaatcttgctaagccaggcaggtggatcgatgttg
aatcgatctgatgttgcccaacaactggatctgtggaaaataaatggtctagactttgat
tatatcgaggaagacaggttaaggatatacgagttgcttgctggtaacatacaaggtgct
ttactagattcaccaattgactggaaaaggtaccttggtttaatcatgtggtatcagtta
tcaccagatacgtcacttgatataatcattcattcttatcatcaactacttggtgagggc
aaagttccaaatcctgttcctgtatacattgatgaaggacctcttgaggaagcagttcag
tggtccccaggtgatcgttttgacctatcattttatttaatgcttcttcatgccaaccag
gatgagaagtttgggctgctaaaaactatgttcagtgcattctcatcatcttacgatccc
ttggactaccacatgatctggcatcaacgttctattctggaagctattggtgcttttagt
gcaaatgatctccatgtactggatttgagttttgttcatcagttactatgtctggggaaa
tgccattgggctatctacgtcattctgcatatgccacatctggatgatgctccttacatc
catgaaaagttaatcaaggaaattttgtcacagtattgtgaattatggagtaaagatgtg
gctcagaggcaatatattacagaacttggtataccagcagaatggatacatgaggctctg
gctcttttccacgaatactatggagatcggcagggtgcactagagaattatatccagtgc
ggcaattggaagaaagctcatacaattttcatgacatctgttgctcattctttgtttctg
tcatcaaatcatcaagagatctggggtattacaaacgttttggagaatcacaagtctgaa
attgctgactgggacattggtgctggaatatacatagactatttcattataaagaactct
atgcaagaagaaagtaccatggatgatgatgattcagatccactggagaggaaaaatgaa
tcatgcaagagtttcttcggccgattaaatgattcactgcatatctggggaagcaaatta
cctgttgaggcgagggcatgcttctcgaagatggcagaggagctcagccagcttctaatg
aactctcctggcgagggtttggggccagatctctacatgggttgctttcatacgatgctc
aatgctcctgtccctaatgaccacaaggcgtcctacctgcaggaggcagtctctgttttc
accgacatactttgtggagattaa
DBGET
integrated database retrieval system
