Brachypodium distachyon (stiff brome): 100846411
Help
Entry
100846411 CDS
T01717
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
bdi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100846411
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100846411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100846411
Ion channels [BR:
bdi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100846411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
100846411
NCBI-ProteinID:
XP_003570272
UniProt:
I1IDC1
LinkDB
All DBs
Position
3:complement(54105730..54110752)
Genome browser
AA seq
695 aa
AA seq
DB search
MFPPRKVEDEMALGRQRTVRFYDERGKPTIPIHQKKAGFAASKLGIASSGKNKIFVGGDV
QYNKIFDPSSDFILTWNRMFLFSCFLALFIDPLYFYVPKIVYSTPYSCVGTDRHLTIIIT
FFRSVADLLYVIHIIMKFRTAFINPSSTLRVFGRGDLVTDPKEIAWKYLRSDFVVDVVAA
LPLPQIIVWYVIPAIKYSTAEHNNNILVLIVLAQYLPRLYLIFPLTYEIVKTTGVVAKTA
WQGAVYNLLLYMIASHVLGALWYLLSVDRQTACWKMTCRNETGCDIRYLDCDAPNKNWSS
ETVVFSSCNASDTSINFDFGMFLPALSNLAPAQGFLIKFFYSLWWGLQNLSCYGQTLSVS
TYIGETLYCIFLAVLGLVLFAHLIGNVQTYLQSITVRVEEWRLKQRDTEEWMRHRQLPRE
LRERVRRFIQYKWLATRGVNEESILQVLPADLRRDIKRHLCLGLVRRVPFFSQMDDQLLD
AICERLVSSLCTKGTYIVREGDPVIEMLFIIRGKLESSTTNGGRTGFFNSTILKPGDFCG
EELLGWALVPKPTANLPSSTRTVKALIEVEAFSLQADDLKFVASQFRRLHSKKLQHTFRY
YSHHWRTWGSCFIQAAWRRYRRRKMAKDLSMRESFPSMRSDESSGEDDPPPKKNLSLKMM
AGKIMAGNRKGLKTLKELPTLKKPDEPDFSAEPYE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaccgaggaaggtggaggacgagatggcgctcggcaggcagaggaccgtgagg
ttttatgatgagaggggtaaaccaacgattcctattcaccagaaaaaggcggggtttgct
gctagcaaacttggtatcgcgagctcagggaagaacaagatttttgtgggaggagatgtg
cagtataacaagatctttgatccatcaagtgacttcatcttgacatggaaccgcatgttc
cttttttcgtgcttccttgctctatttatagaccccctgtacttttacgtgccaaaaatt
gtctacagcaccccttattcctgtgttgggacagacagacatttaaccatcatcattaca
ttcttccgatcagttgctgatttattatatgtgattcacatcataatgaagttcagaact
gcatttattaatccaagctcaaccttgcgggtatttggaagaggagatcttgtcacggat
cctaaagagattgcatggaaatatttgagatcggactttgtagttgatgtggtggctgca
ttgcccttgccacagatcatagtctggtatgtgataccagctattaagtattccactgct
gagcacaataataacattctggtgcttatagttctcgctcaatatcttccaagactatat
ctcatattccctttaacttatgaaatcgtcaaaactactggagttgttgcaaagactgcc
tggcaaggggctgtatacaacctgctactttacatgatagctagtcatgtactaggtgca
ctatggtatttgttgtctgttgatcgccaaacagcctgctggaaaatgacttgtaggaat
gaaactgggtgcgatattaggtacctggattgtgacgcgccaaataaaaattggtccagt
gagactgttgtcttcagtagttgcaatgctagtgataccagcatcaattttgactttggc
atgttcttgcctgcattatcaaatctagctcctgctcagggtttcttgataaagttcttc
tattccctttggtggggtttgcagaatctaagttgctacggccagactctttctgtgagt
acctacattggtgagacattgtactgtatattcttggcagtactcggtcttgtcttgttt
gcacatttgattggaaatgtgcagacctacctacaatccatcactgtgagggttgaggag
tggagattaaagcaaagagacacggaggagtggatgagacatcgtcaacttcctcgtgaa
ctacgggaaagagttagacgatttatccagtacaagtggcttgcaactcgaggtgtgaat
gaagagtctatattacaagttctacctgccgatctacggcgtgacatcaaacgccacctt
tgcttgggtcttgttcgtcgggttccatttttctcccagatggatgaccaacttctagat
gccatctgtgagcgtcttgtgtcatcactgtgcacaaagggcacatacattgtccgtgaa
ggtgatccggtgattgaaatgctctttatcattcgtgggaaactggaaagttccacaaca
aatggtggccgcacaggcttcttcaattcaactatcctgaaacctggtgatttctgtggt
gaggaacttcttggatgggctcttgttccaaagcctaccgccaatttgccatcatccact
cgcacagtgaaggcgctcatagaagtggaggccttttcacttcaggctgacgatctcaag
tttgtggccagtcaatttaggcggttacacagcaagaagttgcaacacactttccgttac
tactcacaccattggagaacgtggggctcatgcttcatccaagctgcttggcgacgttac
aggaggaggaaaatggcgaaggaccttagtatgagggagtcattcccttccatgagatca
gatgaatcaagtggtgaagatgaccctccacctaagaagaatctctctctaaaaatgatg
gccgggaagatcatggctgggaacaggaaaggtcttaagaccttgaaagagttgcctaca
ctaaagaagccggatgagccagatttctcagctgaaccatatgagtag
DBGET
integrated database retrieval system
