Brachypodium distachyon (stiff brome): 100846465
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Entry
100846465 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100846465
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100846465
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100846465
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100846465
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100846465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
100846465
NCBI-ProteinID:
XP_003560376
UniProt:
A0A0Q3RV84
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All DBs
Position
1:complement(26730141..26737418)
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AA seq
1046 aa
AA seq
DB search
MPGGVGGGEGSGGGIDFAALIQAAVVGFVLFTAAVAAVRRAASRYFVVDAAGFASAYDDH
HSSSGALAYPMPPQENHHHQQQQQPMAQGQGQAAAGGGGGETAPCAECGRASIKRCSGCK
RMRYCSGECQSKHWQSDHKFKCKQMKLDSVDKLPCGGEASSKKSSVFGRISLVPGHRKLN
KVIFPYDEFLKLYNWRDHDFLPCGLVNCGNSCFANVVLQCLSCTRPLVAYLLWKDHAREC
SRRHEDWCFLCELQSHIQKATDSLHPFAPMKILSHLPNIGGNLGFGKQEDAHEFMRFAID
KMQSACLDEFGGEKVVDLSIQETTIIQHIFGGRLRSQVQCTACGMVSNRYENMMDLTVEI
HGDAESLEECLNQFTAVEWLDGDNKYRCDGCSDYVKAQKHLTVHQAPNILTITLKRFQSG
RYGKLNKRVTFPTKLDLTRYMSTTDGSDQYDLYAVVVHLDMMNASYFGHYICYIKDFRGR
WRKVDDCKVMIVDEEEVHAQGAYMLLYSRRTARPGPLLTVKEPIKQEKQCGVPPSDGQNH
LLPMDVTLKCESLLKPLEDLREDSESTNESLHKMSIDQESDMDLHINIERDKFITNQSLH
LPVSSASHVLEEATRGPGSLLEDNATMRPDQFGNSACESSSVHSSEEESKEPAPEADYMD
IDFEAGAEVERRNVQEQSVTVSSDSAGVIGNKTLVPTFENGTARKPKPLFSPGFLDKPSR
KKSSFLGKIQNGGSIAVASQTTNGHWNERLSRPEQGHIANSGGQLTSSATGSVHCNGDMF
ATASNGVLFNGDTRSGNHSLHAAKRDAPSVNGFNPRPHRSPSSSNPNRNNTSNSEPFLQR
GFLERPCSREKSVKGDDGLSCSNATSSSSANGNNISNSNISSGSSKGGIGMSPGLLTKRC
RESAAMGSTASFMHDPLTGNISKEQDLVGDAALPDQVQENGIDVSVHGDENGYAALGTNN
ASYGEEICCSGTKNASYGEESCCNGAVDMHSSSCQRDDAPALLVAENGVASENADHLKSI
SPTLGHDGLRRRLTSKYFEQNSVDAQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggtgtcggcggcggcgagggttcgggcgggggcatcgatttcgcggcgttg
atccaggcggcggtcgtcgggttcgtgctcttcacagccgccgtcgccgccgtgcgccgg
gccgcgtcgcgctacttcgtcgtcgacgccgcggggttcgcttccgcgtacgacgatcac
cacagcagcagcggcgcgctcgcgtacccgatgccgccccaggagaaccaccaccaccag
cagcagcagcagcccatggcgcaggggcagggccaggcggccgctggcggcggcggcggg
gagacggcgccctgcgccgagtgcggccgcgccagcatcaagaggtgctccgggtgcaag
cgtatgcggtactgttctggagaatgccagtcgaagcattggcaatctgatcacaaattc
aagtgcaaacaaatgaaactagattctgttgacaagttaccctgtggaggtgaggcaagc
agtaagaagtcgtctgtctttggtcgtatctcgttagtgcctggccaccgaaagttaaac
aaggttatctttccttatgatgagtttttaaagctgtacaattggagggaccatgatttt
ttaccttgtgggcttgtgaattgtggcaacagttgctttgccaatgtggttttgcaatgt
ctttcatgcacaaggccacttgtggcatatctgttatggaaggaccatgcaagggaatgt
tctagaagacacgaagattggtgtttcttatgtgagctgcaatctcatattcaaaaagcg
actgatagtttacacccatttgctcccatgaagattctttctcatttaccaaatattggt
ggcaaccttggctttggtaaacaggaggatgctcatgaattcatgaggttcgcaatagat
aagatgcagtccgcttgccttgatgaatttggaggtgagaaggttgtagatcttagcatc
caggagacaactattattcagcacatatttggcggtcgtctgagatctcaggttcagtgt
actgcctgtggaatggtctcaaaccgctatgagaatatgatggacttgacagttgagatt
catggtgacgctgaatccttggaagaatgcttaaatcagttcactgctgtagagtggctt
gatggggacaataaatacagatgtgatggatgcagcgactatgtgaaagcacagaagcat
cttacagttcatcaagctccaaatatactcactattactctcaaaagattccagagtggt
agatatggaaaattgaacaagagagttacattccctacgaagttagatctaactcgatac
atgagtaccactgatggaagtgaccagtatgatctctatgctgtcgttgttcatctagat
atgatgaatgcttcatactttgggcattatatatgctacataaaagattttcgaggacgt
tggcgtaaagttgatgactgcaaggtgatgattgttgacgaggaggaagtacatgcccaa
ggtgcttatatgcttctatatagcaggagaacagctcgtcctggaccacttcttaccgtc
aaagaacccattaaacaggagaaacaatgtggagtgcctccttcagatgggcaaaatcat
ttgttaccaatggatgttacattaaaatgtgaatcacttttgaaacctttggaagatcta
cgagaagattctgaatccaccaatgaatctttgcataaaatgagcatcgaccaggagtca
gacatggatttgcatataaacatcgagagagataaattcattaccaatcaaagtctacat
ttgccagtttcatcggcatcacatgtcctggaagaagctactagaggcccaggttctctg
ttggaagacaatgctacaatgagacctgaccaatttggcaactccgcatgtgaatcatct
tcagttcattcctctgaagaggaaagtaaagaacctgctccagaagctgactatatggat
atcgattttgaagctggagcagaagttgaaagacggaatgtgcaagaacaatctgtcaca
gtgtcaagtgattcagctggagtgataggcaacaaaacattagtcccgacctttgaaaat
gggacggccagaaaaccaaaacctctattttctcctggtttccttgacaagccctcaaga
aagaagtcttcctttctgggaaaaattcaaaatggtggcagcatagctgttgcttcccaa
acaacaaatggtcattggaacgaacgcctcagcagaccagagcaaggacatattgccaac
tccggtggtcaacttacatcctctgcaactggaagtgtacattgtaatggagatatgttt
gcaactgctagcaatggagttcttttcaatggcgatacacgatctggcaatcactccttg
catgcagcgaagagagatgcaccttctgttaatggttttaatccaaggcctcaccgatca
ccatcaagcagcaacccaaatcggaataatacaagcaacagtgaaccattcttacaacga
ggcttccttgaaaggccttgttctagagagaaatcagtcaaaggagatgatggtttgtcc
tgtagtaatgccacatcatcatcctctgcaaatggcaacaacatatcaaatagtaatatt
tcatctggaagcagcaaaggtggcattggcatgtctcctggtttgcttacaaagcgttgc
agggagtccgcagccatgggctccactgcaagctttatgcatgatccgctaaccggcaac
atctccaaggagcaagatcttgttggcgacgcagcactgccagaccaggtacaagaaaat
ggcattgatgtaagtgttcatggtgatgagaacggatatgcagctcttggcaccaataat
gcgagctacggagaagaaatttgctgtagtggcaccaagaatgcgagctatggagaagaa
agttgctgtaacggagctgttgatatgcatagcagcagttgccaaagggatgatgcacct
gccttgttagtcgctgagaatggcgtggcatctgaaaatgctgaccacctcaagtccata
tctcccacactcggacatgacggtttacgacgaagattaacctccaaatactttgaacag
aatagcgttgatgcccaatga
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