Brachypodium distachyon (stiff brome): 100846503
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Entry
100846503 CDS
T01717
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100846503
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100846503
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_WDR75_1st
WDR54
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
100846503
NCBI-ProteinID:
XP_003568490
UniProt:
I1HJI2
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Position
2:23710198..23720998
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AA seq
463 aa
AA seq
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MGYGMSRLEDEYSEHEGQSSDGLSSAQMNNEFSKLHNDIFHMTHLRSGPSESIRKSIGIN
KHAVSVTRLLRGREVNSSGTGKFFSVDRAFILGHYLPVDGPEIVDRMNSRAYVSQFSADG
SLFVAGFQGSHIRIYDVDKGWEVHKDIHARSLRWTISDVSLSPDQRFLVYASLAPIIHIV
NVGTASKESYANVTDIHDGLDFSQHEDVRYSFGLFSVKFSTDGRELVAGSNDDSIYVYDL
QADKLTLRLPAHTSDVNTVAFADETGNLIYSGSDDNLCKVWDRRCLSTGEPAGVLTGHLH
GITHIDSRGDGRCFISNGKDQAIKMWDIRKMTSNADGSENRVPAWDYTNSRYPQQYKQQK
HPHDQSLATYRGHSVLRTLIRCYFSPTYSTGQKYIYTGSYDASICIYDVVSGSQVAKLHK
GHELAVRDCSWHPFDPMLVSSSWDGRIAKWSRTCSEQDTCELD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggcatgagtaggctagaggatgaatacagcgaacatgaagggcagagtagt
gacggactaagttcagcccaaatgaataatgaattttccaaattgcataatgatattttc
catatgactcatctaagatcaggacctagtgaaagcatccgcaagtcgattggtatcaac
aaacatgcagtctcagtaactaggttattacgtggacgggaagttaattcttcaggaact
gggaagttcttttcggttgaccgtgcattcattcttggtcactatcttccagtggatggt
ccagaaatagtggacaggatgaactcacgagcatatgtttcacagttttctgccgatggt
tctctttttgttgctggttttcagggtagccacataagaatatatgatgtcgacaaaggt
tgggaagtacataaggacattcatgctagaagtttgagatggacaattagtgatgtatcg
ttatcaccagatcaaaggtttcttgtctacgctagtctggcacctattatccatattgtc
aatgttgggactgcttcaaaagaatcatatgctaatgtcactgacatacacgatggattg
gatttttcacagcatgaagatgttagatattcatttggactgttttcagttaaattctcc
actgatggccgagagcttgtcgctggcagtaacgatgattctatatatgtgtatgacctt
caggcagacaaactgacattgcgtttgcctgctcatacatctgatgtcaatactgtagca
tttgcggatgaaactggtaatctcatttattctggaagtgatgataatttgtgcaaggtc
tgggataggcgttgtttgtccacaggggagcctgctggagttttgactggacatttgcat
ggcattactcatatcgacagccgtggagatggtcgatgtttcatatcaaatggaaaagat
caggctattaaaatgtgggacatcagaaaaatgacatccaatgctgatggttccgagaac
agagtgcctgcttgggactacacaaattcaagatacccacaacaatacaagcaacaaaag
catccgcatgatcagtcactagctacataccggggccattcagttctacgcacattaatc
cgttgctacttttctcccacatatagcacaggacagaagtatatatatacaggatcttat
gatgccagtatctgcatctatgatgtggtaagtggatcacaagttgccaaactgcacaaa
ggtcatgagctggcagttcgagattgcagctggcatccgttcgatccaatgcttgttagt
tcatcctgggatggtcggattgctaaatggtctagaacttgttccgagcaagatacttgt
gaactcgattga
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