Brachypodium distachyon (stiff brome): 100846575
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Entry
100846575 CDS
T01717
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100846575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100846575
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100846575
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100846575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100846575
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100846575
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100846575
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100846575
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100846575
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100846575
Exosomal proteins of other body fluids (saliva and urine)
100846575
Exosomal proteins of breast cancer cells
100846575
Exosomal proteins of colorectal cancer cells
100846575
Exosomal proteins of bladder cancer cells
100846575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
100846575
NCBI-ProteinID:
XP_003581066
UniProt:
I1IW31
LinkDB
All DBs
Position
5:3162379..3167555
Genome browser
AA seq
578 aa
AA seq
DB search
MASANAISTASLLRSFSSQGRVRRSRNGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLA
NAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDSA
GDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIAELENKARPVKGSGDIK
AVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFV
TNLEKSVVEFENARVLITDQKITSIKEIIPLLEQTTQLRCPLFIIAEDITGEALATLVVN
KLRGIINVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATVDQLGTARKITI
HQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAAT
ETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTFVPAIKETIEDHDERLGADII
QKALIAPASLIANNAGVEGEVVVEKIKDSEWEMGYNAMTDTYENLIEAGVIDPAKVTRCA
LQNAASVAGMVLTTQAIVVEKPKPKAKVAEPAEGQLAV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccaacgccatctccaccgcctccctcctccgctccttctcctcccagggc
agggtgaggaggtccaggaacggccgtgcgcagcggctagtggtgcgcgcggacgccaag
gacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaagctcgcc
aacgccgtcggcgtcaccctcggcccgcgagggaggaatgttgtgctggatgagtatggc
agtcccaaagtggtgaatgacggtgttactatcgctcgtgctattgagttagctaatcca
atggaaaatgctggtgcagcattgattcgtgaggttgctagcaagaccaatgattctgct
ggtgatgggactacaactgcttgtgtccttgctagagaaatcatcaagctgggcattttg
agtgtaacttctggtgcgaaccctgtatcacttaagaaaggaatagacaaaactgtgcag
ggtctaattgcagagcttgaaaacaaagctaggccagtcaagggcagtggtgatatcaaa
gccgttgcctctatctctgccggcaatgatgaacttattggatccatgattgctgatgct
attgacaaagtgggtccagatggtgtcctttcaattgagtcgtcttcatcttttgagact
actgttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaatttgtg
acaaaccttgagaaatcagtggtggagttcgagaatgctagagttcttataactgatcaa
aagatcacaagcataaaggaaattattccacttctggagcaaactacacaattgagatgt
cctctgtttattatagctgaggacattactggtgaagctttggcaactcttgttgttaat
aagctccgaggaattatcaacgttgcggcaatcaaagccccaagttttggtgagcggcgg
aaggctgtccttcaggatattgccatcgtgacaggtgctgaattcctagcgaaagatctt
ggtctgttggttgagaatgcaacagtagatcaacttggtacagcaaggaaaattacaatt
catcagactacaacaaccctcatagcagatgcagctagtaaagatgagatccaggcgagg
gttgcacagctaaagaaggagctttctgaaactgattctatctatgattctgagaaattg
gcagagagaatcgcaaagctttctggtggtgtggccgtgatcaaggttggagctgcaacc
gagacagagctcgaggaccgccagctacgaattgaggatgcaaagaatgccacttttgcc
gcgattgaggagggcattgttcctggcggtggtgcagcgtacgtgcacctgtctactttt
gtcccggcgatcaaagaaacaatcgaagaccatgatgagcgccttggtgctgacatcatt
cagaaggcactgatagcacctgcgtcgctaatcgcgaacaatgccggagttgaaggtgaa
gtggtggtggagaagatcaaggatagcgagtgggaaatgggttacaatgcgatgaccgac
acgtacgagaacctgatcgaggccggtgtcatcgacccagccaaggtgacaagatgcgct
ctgcagaacgccgcctcggtggccgggatggtcctcaccacgcaagcgatcgttgtcgag
aagccgaagcccaaggcaaaggtggccgagccagcggagggacaactcgccgtctaa
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