Brachypodium distachyon (stiff brome): 100846678
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Entry
100846678 CDS
T01717
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X4
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100846678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100846678
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100846678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
ERCC3_RAD25_C
NttA
Motif
Other DBs
NCBI-GeneID:
100846678
NCBI-ProteinID:
XP_010229149
UniProt:
A0A2K2DV17
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All DBs
Position
1:complement(71590550..71597531)
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AA seq
966 aa
AA seq
DB search
MDPSGCKRQKHEIEHDSSPGNQSQATIISHNSSVRLRFLEQFDDLKYASATKDYKAVNAK
MHELLSTLEKLKEVPIKLPYVSPVLKTSDARLHSATQSGSNFSSDNIIDLDPDNVGDHTH
PNMENTGAHNTTYLVDSGDGDMIKSIRDGNSSGCMQNVNFTQECSLAEQPGQYQDIIMLG
NENINSEDQAVAKQGNDIMDIDNELCFKLKESALFDGHSSSESPELIKQGHGDISIYNEN
HDEQKGKREGEGEDVQSAGSIENNSVPVVDSYDISCEVIQSESTENGNYDRYDNNDSPVD
ELEYLWRDMSLALACSKTIGSDHSIVPSENTCGEVVDDCHHDFLMRDDLGLVCRVCGLIK
KPIDTIIECQWKKPKQSYRTYPSGHRNSNDLDTPINLSRNILQMLPDPLSIHPQHLQQMK
PHQLEGFNFLVKNLADEKNPGGCILAHAPGSGKTFMLISFVQSYLTKYPEGRPLIVLPVG
ILATWRTEFLRWQIEDIPLYDFYSSKANNRSDQLKVLNLWEENRSIMLLGYEHFARIVSE
HTCDTETVKCRKKLLKVPSLVILDEGHTARNKETDLLTSLATIETPRKVVLSGTLFQNHV
SEVFNILNLVRPNFLKMERSRAIVKRILSKVDMFGKSAWSKNTSDKCFYDMVEENLQKDA
NDKIREMIIENLRELTANVLHYYQGELSEELPGLVDFTVFLNMTTKQEESIKSFVGQNKF
SKRSNCNAVSLHPCLKDIKNICEKNENTTYQKIFLRNHEKISSVMSGIDINDGAKLKFIH
NLLSLSESAGEKVLVFSQYVCSLLFLEMLFTRMKGWKPDMHMFMIHGGSVQRDKTIERFN
HSPDAKVLFGSIKACSEGISLVGASRVVILDVHENPSVMRQAIGRAFRPGQTKMVYCYRL
VAADSPEEDDHKTAFRKERVAKLWFEWNEVCVNDDFELTDVDVSESEDIFLESPAMRQDI
KSLYKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagtggctgcaaaagacagaaacatgaaattgagcatgatagctcaccaggc
aaccagtctcaggcaaccatcatcagtcataacagttctgtccgccttcgatttctcgag
cagtttgacgacttgaagtatgcaagtgccactaaagattacaaggcagtcaatgccaag
atgcatgaacttctcagcacccttgaaaagctcaaagaagtacctatcaagttgccctat
gtcagtccagtgctcaagacatcagatgcaagattacatagcgctacccaaagtgggagc
aattttagttctgataatattattgacttggatccggacaatgttggagatcatacccat
cctaacatggaaaatactggggctcacaatacaacctatttagttgattccggtgacggg
gacatgattaaatcaatcagagatggaaattcatctggttgtatgcaaaatgtcaatttt
acccaagaatgctcattggctgagcagcctggccaataccaggacatcatcatgttgggt
aatgaaaacataaattctgaagatcaagctgtagctaagcaaggaaatgacatcatggac
attgacaatgagctgtgtttcaagctcaaggaaagtgctttatttgatggccatagttct
tcagagtcaccagaactgatcaagcaaggacatggcgacataagtatttacaatgagaac
catgacgagcagaaaggaaaaagggaaggggagggtgaagatgtccaaagtgcaggaagc
atagagaacaacagtgtacctgttgtagattcttatgatatatcttgtgaggtcatacaa
agtgagtcaacagaaaatggaaattatgatcgctatgataacaatgacagcccagttgat
gagctagaatacctttggagggacatgtcgcttgcattggcatgttcgaagaccattgga
agtgatcacagtattgttccgtcggagaatacttgtggagaagttgtggatgattgtcat
catgacttcctgatgagagatgatttgggacttgtttgccgtgtttgtggtctgatcaag
aaacccattgatactattattgagtgccagtggaaaaagcccaagcaatcatacaggaca
tacccgtcaggacacagaaactctaatgatctggatacacctattaatctttcaagaaac
attcttcaaatgttacctgatcctctttcgatccaccctcagcatttacaacagatgaaa
cctcaccaacttgaaggttttaatttcttggtcaagaacttggcagatgagaaaaaccct
gggggctgtattctagcacatgcaccaggttctggaaagacctttatgctaattagcttt
gtccagagctacctgaccaaataccctgaaggacggccattgattgtccttccagtgggc
attttggcaacatggagaacagaatttctccgttggcagattgaggacattcccttgtat
gacttctactcctccaaagctaataaccggtctgatcaattaaaagttttgaacttgtgg
gaagaaaatagaagcataatgttgcttgggtatgagcattttgcacgcatagtttctgag
cacacttgtgatactgaaaccgtcaagtgtcgaaagaaactgttgaaggtcccaagcctt
gtcattctagatgaaggccacactgccagaaataaggaaactgacttgctcacttcactt
gcaacaatagaaactcctagaaaagtggtgctctcaggaaccttgtttcagaatcatgta
agtgaggttttcaacattttgaaccttgtccggccaaatttcttgaagatggagagatcc
cgtgcgatagtgaagcgcatattaagcaaggttgatatgtttgggaagagtgcatggtca
aagaacacttcagataagtgcttctatgatatggttgaagaaaaccttcaaaaggatgca
aatgataaaatcagagagatgatcattgagaatctacgtgagctaactgcaaatgtgctc
cactattatcaaggcgagctttcagaggagctacctgggcttgtggacttcacagttttt
cttaatatgactaccaagcaggaagagagcattaagagttttgtgggacaaaataaattt
agtaaacgttcaaactgcaatgctgtttctcttcatccatgcttaaaggatatcaagaac
atatgtgagaaaaatgaaaataccacatatcagaagatctttttgaggaatcatgagaaa
attagctccgtgatgagtggaattgatataaacgatggggcgaaactaaagtttatacac
aatctcttgtctctttcagaatctgctggagagaaggtacttgtgttcagccagtatgtc
tgttctctacttttcttggaaatgctgttcacaagaatgaaaggatggaaaccagacatg
cacatgttcatgatacatggcggatcagttcagagagacaagaccatcgagagattcaac
cactcaccagatgctaaagttctctttggttccatcaaggcttgcagcgagggcatctcg
ctcgttggtgcatcacgtgttgtcattctggatgtccatgaaaatccttctgtgatgcgc
caggcgattggacgtgcattcagaccaggacagactaaaatggtgtactgctaccgtctc
gttgccgctgactcccctgaagaggatgatcacaagacagcctttcgaaaagaacgggtg
gccaagctgtggtttgaatggaacgaggtttgtgtaaatgatgattttgagcttactgat
gttgatgtttcagagagcgaggatatttttctggaaagccctgcaatgcgacaagatatc
aaatccctatacaaaaggtga
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