Brachypodium distachyon (stiff brome): 100846732
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Entry
100846732 CDS
T01717
Name
(RefSeq) pumilio homolog 3
KO
K17943
pumilio RNA-binding family
Organism
bdi
Brachypodium distachyon (stiff brome)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
100846732
NCBI-ProteinID:
XP_003572951
UniProt:
I1IDZ6
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All DBs
Position
3:55516529..55522613
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AA seq
1010 aa
AA seq
DB search
MAPSPAGAAGPTFEDLERDLQAVLMDQNHGSSAEELNMYRSGSAPPTVQGARAAVGTLFS
AAPPAHVDRYGGGSSSGGVGDMLSEEEILSHPAYLQYYYSNEHLNPRLPAPMVSKEDWRT
AQRFQAVSGGIGDRRRRPSEVASGGSLFSVQPGAHEGNGMEFLVNDGMSRGERNGLARQQ
SSEWLGQGTDGLIGLSDVNGLGSRRKSFADALQENMSSPAAKAGHLSRSNSRNAFEGPNP
TRSSGSSKAQLQSRSESINGFRSGATSPSLVRVQSLGSSMSQTFASAVGSSISRSTTPDP
QLIQRAPSPCLPPVGVRMAKADKKVEGAGVASHHNHDGSDTATVLSAMSNLNLSGNNKMA
NLETEVQNHIYQNFGDQRDVLFNVPNEHIQFPQQKLVQSADVESLNTPEYAVFPNGSSNF
SNSNMNKLAAESKSKFPTQSNHGNAHKKGSFLSPTGSAYLYQNLNGNSSNVDVSGRHPKA
SARNSGSSMLNNHLNTDDEYVNLHSNQGGPGFQGQPMDTVYAHYLQANSDSPLGAAANMS
PFRGSNFPGSGHLGGPGFSKAYLGSLLAQQKLQYGMPYLGKSGGLSPTLYGSEPAYGMEM
AYLSSPTSSPFISSPQGHVRQGDRLTRIPSMARSTTGGTVGSWSSENGLIDNGYGSSLLE
EFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASTEEKNTIFPEILPQARTLMT
DVFGNYVIQKFFEYGTEAQKKQLASLLKGYVLQLSLQMYGCRVIQKALEVVGVEHQTQMA
LELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGHVVDLSTHPYGCRVIQRVL
EHCDDESTQNAMMEEIMQSVVPLTQDQYGNYVIQHVLQYGKPEERTSIITQLAGQIVKMS
QQKFASNVVEKCLSFGSHEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDD
HNRELILSRIKVHLNALKRYTYGKHIVARVEKLIAAGERRIGVSSSSCRD
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtctccggccggagctgctggccccacctttgaggaccttgagcgtgaccta
caggctgtgctgatggaccagaaccatggctcctctgctgaggagctcaacatgtaccgc
agcggcagcgctccccctactgttcagggcgcccgtgctgccgttggtacgctcttctct
gctgcgcccccagctcatgttgacagatatggcgggggcagcagcagcggtggtgtcggt
gacatgctatctgaggaggagatactctctcacccagcatacttgcagtactactacagc
aatgagcacctcaatccgaggctgccggcaccgatggtgtcgaaggaggactggcgtaca
gcacagagatttcaggctgtttctggcggcattggggatagaaggaggaggccctcggag
gtggcgagtggaggttctctgttctctgtgcagccaggagcacatgaaggtaatggtatg
gagtttcttgtgaatgatggaatgagcagaggtgaaaggaatgggctcgcacgtcagcaa
tcatctgagtggcttgggcaaggcactgatgggctcattgggttgtctgatgtaaatgga
cttggatcccgtcgcaagagctttgcggatgccttgcaggaaaatatgagcagtcctgct
gctaaagctggtcatctttcacgctctaatagccggaatgcttttgagggcccaaaccca
actagatcatctggttcatcaaaagcacaactgcagagtaggtctgaatccattaatggc
tttcgatctggtgccacttcacctagtcttgtgagggtccaaagtttaggttcttcaatg
tcccagacatttgcttctgcagtaggctcctcgatctcaagaagcaccacccctgaccct
cagttgattcagagggctccaagcccatgccttcctccagttggagttaggatggcaaaa
gctgataagaaggttgaaggcgcaggtgttgcttctcatcataatcatgatggttctgat
actgcaacagttctatctgctatgtccaacttaaacctctctgggaacaacaagatggcc
aatttagaaactgaagtgcaaaatcacatttaccagaactttggtgatcaaagagacgtg
ctgtttaatgttccaaatgaacatatacaatttcctcagcagaaattagttcaaagtgct
gatgtagagtcactaaacaccccagaatatgcagtgtttccaaatggtagcagtaacttc
agtaattcaaatatgaataaactggcagctgaaagtaagagcaagtttcctacacaatca
aatcatggcaatgcccacaagaagggatcttttctgagcccaactggttctgcgtatcta
taccagaacctgaatggtaatagctcaaacgttgatgtgtctggacgacatccaaaggcc
agtgcacgaaattctggttcatccatgctgaacaatcacctgaatactgatgatgaatat
gtcaaccttcattcaaatcaaggggggcctggttttcagggccaaccaatggacacagtg
tatgcgcattacttgcaggcgaactctgactctccccttggtgcagctgcaaacatgagt
cctttccgtgggagtaactttcctggttcaggccacctgggtggtcctggattttcaaaa
gcttatcttggatcgttgcttgctcagcagaagctacagtatggtatgccatacttgggc
aaatctggtggtcttagcccaactctttatggcagtgaaccagcatatggcatggaaatg
gcatatttatcaagtccaacatctagcccttttatctcatctcctcagggccatgtcagg
caaggagataggctaacgcgtattccatccatggcaaggagcaccactggaggaactgtg
ggatcatggagttcagaaaatggtctaatagataatggttatgggtcttctctgctggag
gaattcaagaccaataagaccagatcttttgagctactagatattgttggtcatgtggtt
gagttcagctcggatcagtacggaagtcgatttatacagcagaaacttgaaacagcttct
actgaagagaaaaacaccatttttccagaaatccttccccaagcacgaacattgatgact
gatgtttttggaaattatgttatacagaagttcttcgaatacgggactgaagcacaaaag
aagcaactggcaagcctactgaagggttatgtattacagctgagtcttcaaatgtatggt
tgccgggtgattcagaaggctttagaagtggttggtgtggaacatcaaacacaaatggct
ttggagctagatggaagtatcatgaaatgtgttcgtgatcagaatggcaatcatgttatc
caaaagtgcatagaatgcatccctcaagaaaggatacagtttattatttctgctttttat
ggacatgtggttgacctttccacccatccatatggttgccgtgttattcagagagtcttg
gagcactgtgatgatgaaagcacacaaaatgccatgatggaagagatcatgcagtctgtg
gttcctttgacacaagaccagtatggcaattatgttatccagcatgtcttgcaatacggg
aaaccagaagaacgtacttctataattacacaacttgccggacagatcgtgaagatgagc
caacagaagtttgcctccaatgttgttgagaaatgcctttcctttggttctcatgaggaa
cgtcagattctaattaatgaaatgcttggcactactgatgagaatgagccattgcaggca
atgatgaaagaccagtttgctaactatgtagtgcaaaaggttctggagacttgcgatgac
cacaaccgtgaactgattctttcacgtatcaaggttcacctgaatgcactgaagagatac
acctacgggaaacatatagttgcccgggttgagaaacttattgcagcaggagaaaggcgt
atcggggtctcatcgtcgtcttgcagagattga
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