Brachypodium distachyon (stiff brome): 100846752
Help
Entry
100846752 CDS
T01717
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
bdi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100846752
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100846752
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100846752
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100846752
03036 Chromosome and associated proteins [BR:
bdi03036
]
100846752
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100846752
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100846752
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100846752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
TOR1L1_N
Cnd1
CLASP_N
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
V-ATPase_H_C
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
100846752
NCBI-ProteinID:
XP_003577085
UniProt:
I1IIX4
LinkDB
All DBs
Position
4:7918669..7927279
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKAVESLCRIGAQMKEN
DIVDFFIQVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKAELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVG
HILPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPDWAMQYIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPIVINSSKDRVPNIKFNVAKVLQS
LVPIIDQSVAEKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtcgatgagcctctgtatccaattgctgtactgatagatgagcttaaaaat
gaagatattcaattgcgactgaactccatcagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgattccttttctcagtgaaaacaatgatgatgaa
gatgaagtgcttcttgcaatggcagaagaattgggcgtgttcattccttatgtcgggggt
gtagaacatgctcatgttttgctcccaccattggagacactgtctacggtggaggaaact
tgtgtccgagacaaagcagtcgagtcgctgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttctttatccaagttgtaaagaggctagcatctggtgaatggtttaca
gctcgggtatcatcatgtggtcttttccatatagcgtatccaagtgccactgatccgttg
aaagcagaacttaggaccatttatggccagttatgtcaagatgacatgcctatggtcaga
agggcagctgcatcaaatcttgggaagtttgctgcgacagttgaacagagccatttgaag
acagaaatcatgtcgatatttgatgatttaacccaagatgatcaagattcagtacgttta
ttagctgttgaaggctgtgctgctcttggaaaattgttggaaccccaagattgtgtagga
catatccttccagtcattgtcagtttctcccaggataaatcttggcgtgttcgttatatg
gttgccaatcaattgtatgagctctgcgaggctgttggccctgagcctactagaacggac
ctggtgcctgcatatgtccgccttcttcgtgataatgaggctgaagtgcggatagcagct
gccggaaaagttactaagttctgtaggatattaagtccgcagcttgcaattcagcacatt
cttccatgtgtcaaggaactatcatcggattcgtctcagcatgttcgctcagctttggct
tcagtcattatgggaatggcccctgttttggggaaggatgctaccattgaacaacttctt
cctatttttctttctttgctgaaggatgaatttcctgatgttcgactcaacataattagt
aaactcgatcaagtcaatcaggtcattggaattgatttgctgtctcaatctctattgccg
gccattgtagaacttgcagaggataggcattggagagtgcgccttgcaataattgagtac
atccctctgctggccagtcagttaggtgttgggttttttgatgacaagctgggggcactt
tgtatgcaatggttggaagataaggttttctctataagagaagctgctgcaaacaacttg
aagcgcctggcggaggagtttggtccagattgggcaatgcagtatataatccctcaggtg
ctggagaagataaacaacccacattatctgtatcgcatgaccatcctgcaagctatctca
ttgctagcccctgtcatgggtgcagaaataacatgccaaaagctgctcccaatcgtcata
aattcctcaaaggacagagtgccgaacatcaagttcaatgttgcaaaggttctgcagtcg
cttgtaccaatcattgatcaatctgttgccgagaagactgtgaaaccatgccttgtcgag
cttagcgaggaccctgatgtcgatgtaagatactacgcaaaccaggcccttcaggcatgt
gatcaaatcatgatgtcaagctaa
DBGET
integrated database retrieval system
