Brachypodium distachyon (stiff brome): 100846788
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Entry
100846788 CDS
T01717
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100846788
03009 Ribosome biogenesis [BR:
bdi03009
]
100846788
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100846788
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100846788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
NRN1
Motif
Other DBs
NCBI-GeneID:
100846788
NCBI-ProteinID:
XP_003563183
UniProt:
I1GLB4
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All DBs
Position
1:2017097..2022198
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AA seq
659 aa
AA seq
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MASGGVVQSSNKRKREAAAGKPKPGAKGAGEATKWKKPHDASVARGGGRAEEKPQPVTAK
EKRVAAKEMSESRKMKRKPNYDLEKELTVRWEKMRCHDVSKEDRSKLVTEALSKMNGKYL
EIAGSHVTARVLQTCVKWCSQSERDAIFVALQPHLLTLCRQKYAVFLVKKLIKLATKKQF
HWFISSLHGHVASLLRHTIGAAVVDCAFQRATPSQKRSLLLELYSTELQLFKGLTEQKSQ
SLLETISKLGLQKSSVLQYMTIVIQPLLEKGIVEYSIVHTVILEYLTIADKTSAMDVIRQ
LIPHLTQGSSVIDGDELSGVPELPTKTKAKKKRSSEPRLIRIMYSREGLKLALACLKHGS
AKDRKKIIKSLKGQIMKLALNEYGCLFLVCLLSIVDDTKLVTKIVIQDLTKHLKQLIFDK
NGRHPLLQLLRPLCSRYLPPAYLAYLNYSVPSLISNVEASENATEVNLENQVDAVADKDH
GASEDTLVASDSKKDPLQRRIELLMKSELAEALVQTCVENVGELLRSNIGNGFLYEVSVG
GKDNVLEGISDRILTLHDAIASDAAHPRTEDIEHAFDNYHSSRMIKKLVVDCPAFAATLW
EIALEGKCELYAEGHSSKVLTAYLESNDSMVRDVAKSKLQPLIDRGILKIPDHKASEKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcggcgtagtccagagctctaacaagcggaagcgcgaggcagcggcgggg
aagcccaagcctggggcgaagggcgccggcgaagccaccaagtggaagaagcctcatgac
gcctccgtggcgcgtggcggcggccgggcagaggagaagccgcagccggtcaccgccaag
gagaagcgcgtcgctgccaaggaaatgtcggagtcgaggaagatgaagaggaagccgaat
tacgaccttgagaaggaacttacggtacgatgggaaaagatgagatgtcatgatgtgagc
aaagaggataggtccaagctagtaactgaggctcttagcaaaatgaacgggaaatatttg
gagattgctggatcccatgtaactgcacgcgttctacaaacatgtgtgaagtggtgctct
cagtcggagagggatgctatttttgttgccctgcagccacatttgctcactctttgtcgt
cagaaatatgctgttttccttgtaaagaaactcataaagcttgccaccaaaaaacagttc
cattggttcatctcttctcttcacggtcatgtcgcctcacttcttcgtcacacaatagga
gcagcagttgttgattgcgcatttcagcgagcaaccccatctcagaaaagaagtttgtta
ttggaattgtactccactgagcttcagctgttcaagggcctgaccgaacaaaaatcacag
agtttgttagaaactatttccaagcttggattacagaaatcatctgtcctgcagtacatg
actattgttatccagccccttctggagaaaggtattgttgagtattccatagtgcacacg
gtcatattggaatatttaacaattgctgataagacatcagccatggacgtgattcgccag
ttaatcccccatcttactcaaggttcatctgtgattgatggggatgaactatcaggtgtc
cctgaattaccaaccaaaacaaaagctaagaagaaaagatcttcagaaccacgtctcatc
cggatcatgtactcaagggagggattaaaattagcgcttgcttgcctaaagcatggcagt
gcaaaggataggaagaagattattaaaagcttgaaggggcaaattatgaagcttgctctc
aatgagtatggatgccttttccttgtttgtcttctctccattgttgatgacacaaaactt
gttactaagattgtaattcaagatctgacaaagcacttaaagcaactcatattcgataag
aatgggagacacccattgctgcagctacttcgcccactttgctcacgctatctacctccg
gcttatttggcttatctgaattacagcgtgccttcccttatttcaaatgttgaagcatca
gagaatgctactgaagttaacttggagaatcaggtggatgctgtagctgataaagatcat
ggtgcttcagaagacacactggtcgcgtctgacagcaaaaaggacccattgcaacggaga
attgaattgttgatgaaaagtgagcttgctgaggctcttgtccagacttgtgttgagaat
gttggagagttacttcgatcaaacattggcaacggatttttatatgaggtatctgtcggt
ggaaaagataatgtactggagggcatcagtgacaggatcctcacactccatgatgcaata
gcttctgatgcagcacacccaaggacagaagatattgaacacgcctttgataactaccat
tccagccgcatgataaaaaaattggtagttgattgtcctgcatttgcggctaccctctgg
gaaatagctcttgaagggaagtgcgagttatatgctgagggacacagttccaaagtgctc
actgcatatctggaatccaatgattccatggtgagggatgttgcaaaatccaagctgcag
ccgctgattgaccgcgggatactgaaaatcccagaccataaagcatcggagaagaagtga
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