Brachypodium distachyon (stiff brome): 100846907
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Entry
100846907 CDS
T01717
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100846907
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100846907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
RRM_10
RBD_AKAP-17A
DUF8400
Motif
Other DBs
NCBI-GeneID:
100846907
NCBI-ProteinID:
XP_003566893
UniProt:
I1HPH2
LinkDB
All DBs
Position
2:complement(44020630..44026244)
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AA seq
544 aa
AA seq
DB search
MASGGNPQFRYTQPPSKVIHVRNLPWECTDEELAELGSPFGKVVNTKCNVGANRNQAFIE
FADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIVNSKSTGDAAGNVLLVTMEGVL
PDAVSIDVLHLVFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAALDGRCIPSYLL
PDLDGACTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSGLDGKKQEAESNVL
LASVENMQYIVTIDALHEVFSAFGFVHKIAIFEKNSGFHALIQYPDIQTAVKAREALEGH
SIYEGGYCKLHLTFSRHTDLNVRINNERGRDYTGGSSAPANYEPSILGPQPTLPVGAVAP
PYSSASPAATGAVVPPGTTTILATPSPRPFHPSGEPHPQSAGGPQQYPNQGILQGALGVP
PQIPGYGAPEFPQGPSQAQMAHHSGQGSQQMPNHQLPQGMPFPGHGGQQLHPGPQMMQAP
GYRGPPFPQGPMQPMPQFPVYGNQQFPVYGNQQFPPGSGPQMMGFPGQGGQYPPFGRPLH
PYNR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggcgggaatccgcagttccggtacactcagccgccgtcgaaggtgatccat
gtgaggaacctgccgtgggagtgcactgacgaggagctcgccgaactggggagcccattc
ggcaaggtggtcaacaccaagtgcaacgtcggtgccaaccggaaccaggcgttcatcgaa
tttgctgaccaaaatcaggcgattgctatgatatcttattatgcatcgtcagcggagcca
gcacaggtaagaggcaaaaatgtgtaccttcagtactccaatagacaggagattgtcaac
agcaagagtacgggggatgctgctggcaatgttttgctggtaacgatggagggtgttctg
cctgatgccgtgagcatcgacgttctacacttggtattttctgcatttggatatgttcac
aagattgctacctttgagaaggcatctggttatcaggcactgatacagttctctgatgct
gagactgcatcttctgcaaaagctgctctggatggcagatgcattcctagctacttgctt
ccagacctggatggggcttgcactttaagaataaattattcagcacactctgttctgaat
gtcaagtttcagagtcacaggagtagggactatactaacccataccttcctcttgcgcct
tctgctattgatggatctggactggatgggaagaaacaggaggcagagagcaatgttctg
cttgcatcagttgagaatatgcagtatattgttacgatagatgctcttcatgaggtcttt
tctgcttttgggtttgtacacaagattgctatctttgagaagaactctggtttccatgca
ctaatccagtatccagatattcaaactgcagttaaagcaagagaagcattagaaggacac
agcatatatgaaggcggatattgcaagcttcacctcacattttcacgccatactgatctt
aatgtcaggatcaacaatgagcgtggtcgagattacactggagggagcagtgctccggct
aactatgaaccttccattcttggtcctcagccaacacttcctgttggtgctgttgcacca
ccatacagcagtgcttctcctgcagccactggagcagtagtgccaccagggactacaact
attctggcaacaccatcccctcgacccttccatccttccggtgagccacacccacaatct
gcaggtggaccacaacagtatcccaaccagggaatcctacaaggcgcccttggtgttcct
ccacagatccctggctatggtgccccagagtttccccaaggcccatctcaagctcaaatg
gcacatcattcaggccaaggaagtcaacagatgccaaatcatcagctgcctcaaggaatg
ccgttccctggccatggagggcagcagctacatccaggtcctcaaatgatgcaagctcca
ggttatagaggcccgccgtttccacaaggtcctatgcaaccgatgccgcagtttccggta
tacggcaaccagcagtttccggtatacggcaaccagcagtttcctcctggttctggaccg
cagatgatgggctttccaggacagggaggccagtatcctccatttggtaggccgcttcat
ccgtataaccgttag
DBGET
integrated database retrieval system
