Brachypodium distachyon (stiff brome): 104581395
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Entry
104581395 CDS
T01717
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
104581395
Spliceosome [BR:
bdi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104581395
Other components
Complex C specific factors
104581395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
104581395
NCBI-ProteinID:
XP_010227194
UniProt:
I1IZL5
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All DBs
Position
5:19013509..19014912
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AA seq
467 aa
AA seq
DB search
MASAGAGEWSRSNGEAEWETSGGGDDDGSGYDSDSDGDSTYSLDSNPEVENIPHADTSRE
PENTWADDDVTRPYRQPWLWVREWQRHEAEASRKQIQAFCAEILAKTGEQQKNDPVRAPQ
QDLATEVAVMTVRLASMKKRTAGDVIREFTRLKSLFPEESYKAKFFLAGTAGRIVAPLLH
PVFQTWKPLRDPALWLDVAGPLKNVLEVDGPRLSPYARLIDDTVVPAVQASEWKYTDPDQ
MLRFLTAWKDALPQPAVRGILEKIVMPELADAVASWDPRCAWNANLHIFLQPWVPLAGPL
LESRLYDAVRQKLEKGVWDWDDTTVDALVANRRMLSPWKALFTPESWELLLGRIKVAPNL
RLRLRRVEITLTPPKQKDDAFLQVMKWAPFVPPQGVVWLLEAEFFGRWLGALRGLRAASG
PSTGEAVAWCKGWKRLFTVELLADELVKARFQAGFDMVSRAAAGLEI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctggtgctggagagtggagccggagcaacggcgaggctgagtgggaaacg
agcggcggcggcgacgacgacggctcaggctacgactccgactccgacggcgacagcaca
tatagcctggattccaaccctgaggtggaaaacattccccacgccgacaccagcagggag
ccggagaacacgtgggcagatgacgacgtaacaagaccctatcgtcagccgtggttgtgg
gtccgcgagtggcaacggcacgaagccgaggcatcgcgaaagcaaatccaggcgttctgc
gcggagatcctcgccaaaacgggggagcagcagaagaacgaccccgtccgggcgccgcag
caggatctggcgaccgaggtggccgtgatgacggtgcggctcgcgtccatgaagaagcgc
acggcgggcgacgtgatccgcgagttcacgaggctcaagtcgctgttcccggaggagtcg
tacaaggcgaaattcttcctcgcgggcaccgcgggccggatcgtggcgccgctgctccac
cccgtgttccagacgtggaagccgctcagggaccccgccctctggctggacgtcgccggc
cccctgaagaacgtactggaagtcgacgggccacgcttgtcgccgtacgccaggctgata
gacgacaccgtggttccggctgtccaggcgtccgagtggaagtacacggacccggaccag
atgctccggttcctgacggcgtggaaggacgctctgcctcagcccgccgtgcgagggatc
ctggagaagatcgtcatgccggagctggccgacgcggtggcgtcgtgggacccgcggtgc
gcgtggaacgccaatctccacatcttcctgcagccgtgggtgccgctcgccggccccttg
ctagagagccgcctgtacgacgccgtgaggcagaagctcgagaagggggtgtgggattgg
gacgacacgactgtcgacgccttggtcgccaaccgcaggatgttgtcgccgtggaaggcg
ctgtttaccccggagagctgggagctgcttctgggccggatcaaggtggcgccgaacctg
aggctgcgcctgcggagggtcgagatcacgctcacgccgccgaagcagaaggacgacgcg
ttcctccaggtgatgaagtgggcacccttcgtgccgccgcagggcgtggtgtggctcctg
gaggcggagttcttcggaaggtggcttggagcgctgcgcgggctacgggctgcctcggga
cccagcactggcgaggccgtcgcgtggtgcaaagggtggaaacggctcttcacggtagag
ttgctcgccgatgagctcgtgaaggcgcgtttccaggccggcttcgacatggtcagccgt
gcggcggcggggctggagatttag
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